Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0295 ATGTCTGCATGTGTTATACTATTGTTGATATCTGCTAGTTCTCTCCTGATTCATTCTTCACATTCTCTTGAGCCTAAAAGAGAAGCTTTAGAAATCATCATCGGCGGTGGCGGAGGAAATACCGGAAATGCCCCTACCTCTTCCCCTGAATGTGGAGAATGTCAGTATCCTCCGCCTCCTCCGCCCCCTTCTTGCTCCCCTCCGCCGCCTCCTCCGCCATGCCCACCTCCTCCTTCTCCCCCTCCGCCGCCCCCTCCCCCTCCGCCCCCTCCTCCTCCTCCTCCTCCTCCTCCGCCGCCGCCTCCTCCTCCTCCGAAGAGGATATATCAGGAAACTAGGCTGCAGAAAGCAAAAAAGGTGCTCTTAGAATTCAAGAAAAACATCTGCGACCCAAATGGGAGAACATCAAACTGGAAAAAATCAAACGACGTATGCAAATTCAACGGCATACGCTGCGCAGATTTCCCAGTGGATAAACAGAAAGCAGTCGCCGGGCTTGATTTCAACGGCTACGCTTTGTCATCTCAGATACAAAACAAACCGTTGGATCTTTTCGGATCATTGGCAAAAATCCCAGAGCTAGCATTCTTCCACGTCAACTCCAACAATTTCACCGGCCAGGTCCCACCTGAAATCACCAAGTTCAAATATTTCTTCGAGCTTGACCTTAGTAACAACAAGATTTGCTCTCAGTTCCCAAATGAAGTCCTTCAATTCACGCAACTTCTCTTCCTCGATCTCAGGTTTAACCAAATCTATGGTCCCATTCCACCTAAGCTCTTTAGATTGGACCTTGATGTCATCTTCATCAACAACAACAAGCTCACAGGGAATCTTCCCGATGAAGAATTTGGGTCCACTCCTGCGAGATATCTCACTTTCGCTAACAACATGTTAACCGGTCGCATCCCCAAGAGTATTGGAAGAGCAACCAACATAACGGAAATTCTGTTACTGGGGAATCAGTTTTCTGGGTGTTTGCCTTATGAGATTGGGTTTCTTAAAAAAGCTACGGTTTTTGATGTGAGCAACAATTGGTTGACTGGTCCAATTCCACATTCTTTTGCTTGCTTGGACAAGATTCAGTTTTTGAACTTGGCGTATAATAAATTCTATGGGGCGGTTCCTGAATCGGTTTGTAAGCTTCCGGAGCTCCAGAAAGGCGGGAATTTGACGTTGTCGGGTAATTATTTCACTCAGGTGGGACCTGAATGTCGGAAACTGATTGACCGGAAAATTCTGGATGTTCGCCGGAATTGTATTCTGGGACTTCCAGATCAGAAGTCACCGGCGGAATGTACCAAGTTTTTCTCCAAGGTTAAGCCATGTCCGAACCCAAAGACTCTGAACATCGTACCTTGTAACAAGTACGTTGCCAGCAACAAGGAGACGGTGCCGGTACCGGAACCTGCGGCTGTAGGATCGCCGCCGCCGACGCCGGTGACCTACAAATCCCTCAAACCACACCGCTTGTGA 1476 0.4817 MSACVILLLISASSLLIHSSHSLEPKREALEIIIGGGGGNTGNAPTSSPECGECQYPPPPPPPSCSPPPPPPPCPPPPSPPPPPPPPPPPPPPPPPPPPPPPPPPKRIYQETRLQKAKKVLLEFKKNICDPNGRTSNWKKSNDVCKFNGIRCADFPVDKQKAVAGLDFNGYALSSQIQNKPLDLFGSLAKIPELAFFHVNSNNFTGQVPPEITKFKYFFELDLSNNKICSQFPNEVLQFTQLLFLDLRFNQIYGPIPPKLFRLDLDVIFINNNKLTGNLPDEEFGSTPARYLTFANNMLTGRIPKSIGRATNITEILLLGNQFSGCLPYEIGFLKKATVFDVSNNWLTGPIPHSFACLDKIQFLNLAYNKFYGAVPESVCKLPELQKGGNLTLSGNYFTQVGPECRKLIDRKILDVRRNCILGLPDQKSPAECTKFFSKVKPCPNPKTLNIVPCNKYVASNKETVPVPEPAAVGSPPPTPVTYKSLKPHRL 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0295 491 MobiDBLite consensus disorder prediction 38 90 - -
Mibi03g0295 491 Gene3D Ribonuclease Inhibitor 114 286 IPR032675 -
Mibi03g0295 491 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 111 477 - -
Mibi03g0295 491 Gene3D Ribonuclease Inhibitor 287 457 IPR032675 -
Mibi03g0295 491 Pfam Leucine rich repeat N-terminal domain 117 152 IPR013210 -
Mibi03g0295 491 PRINTS Proline rich extensin signature 71 92 - -
Mibi03g0295 491 PRINTS Proline rich extensin signature 92 108 - -
Mibi03g0295 491 PRINTS Proline rich extensin signature 58 70 - -
Mibi03g0295 491 MobiDBLite consensus disorder prediction 468 491 - -
Mibi03g0295 491 SUPERFAMILY L domain-like 117 424 - -
Mibi03g0295 491 MobiDBLite consensus disorder prediction 52 90 - -
Mibi03g0295 491 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 304 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0295 Mibi-ChrMibi03 3325777 3327252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0295 105 439 Leucine-rich Repeat extension Gene Families AT3G24480 41.420 1.16e-75 244