Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0288 ATGGGTGAAGAGAAAGAAGCTCAGAAGAAGAAGAAGAACCAGATGGGACCACCACCATTACCAATCATAGAAGGAAGAAGCTCTTGCAACAATAATAATGACTCTCTTATTGTTGCTCGTCACAACCAACAGGTTAATGAGGAAGGTGATAATAAGACGACGTCGTCTAGGGCAGCTGGCCATGGAGGAAGGAAGAAGACAACCACCGGCGATATGCACATATGGACGGAGAGAGAGAGGAGGAAGAAGATGAGAAACATGTTCACTGACCTTCATGCCCTCCTTCCCCACCTTCCTCCTAAGGCTGACAAAACAAGCATAGTTGATGAAGCGGTGAGGTACATTAAAGTCCTGGAGAACACACTGGAGGATCTGGAAAAGAAAAAACAGGAAAGGCTAAAGCAATTATTAGCCCAGAAGTCATCAGCTGATGAATGTTCAACCACCACTATTGTGTATGACTCTTATGTGCATAATATCAGCTCTAAGATTTCAAGGGAGGCTTTCATGGCTGATCATGGTAGTGGAGGATCATCTTCTCCTTCCATTATTAATAACAACAACAACTTGGCCTCCACCACCGTTATTGGAACTTCATCACTACCATCACTTTCTGGCGGAGGAGTTGTGAATGATAACAACAACCCACCAGTGGGGTTTCAGACTTGGACCTCTACAAATGTTGTGGTCAACATTTGTGGTGATCAGGCTCAGTTCAATGTTTGCTCCCTCAAAAAGAAAGGCCTCTTCACTAGCATCTGTGCTGTGTTTGAGAAGTACAAGATCCAGGTTTTGTCTGCTCATGTTTCTTCTGATGATCGTCGAGTCTTTTTCATGATTCATGCTCGGGCAAATCAATTTGAAGAGGCATTTCCAGCTGTGAAGGAAACTTTCAGGCAAGCAGCTGGAGAAATGACGCTGTGGCTATCTTAA 933 0.4416 MGEEKEAQKKKKNQMGPPPLPIIEGRSSCNNNNDSLIVARHNQQVNEEGDNKTTSSRAAGHGGRKKTTTGDMHIWTERERRKKMRNMFTDLHALLPHLPPKADKTSIVDEAVRYIKVLENTLEDLEKKKQERLKQLLAQKSSADECSTTTIVYDSYVHNISSKISREAFMADHGSGGSSSPSIINNNNNLASTTVIGTSSLPSLSGGGVVNDNNNPPVGFQTWTSTNVVVNICGDQAQFNVCSLKKKGLFTSICAVFEKYKIQVLSAHVSSDDRRVFFMIHARANQFEEAFPAVKETFRQAAGEMTLWLS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0288 310 SMART finulus 76 124 IPR011598 GO:0046983
Mibi03g0288 310 Coils Coil 108 139 - -
Mibi03g0288 310 Pfam Helix-loop-helix DNA-binding domain 75 118 IPR011598 GO:0046983
Mibi03g0288 310 Gene3D - 66 145 IPR036638 GO:0046983
Mibi03g0288 310 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 9 309 IPR044278 GO:0003700|GO:0006355|GO:0009960
Mibi03g0288 310 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 68 118 IPR011598 GO:0046983
Mibi03g0288 310 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 140 IPR036638 GO:0046983
Mibi03g0288 310 MobiDBLite consensus disorder prediction 1 69 - -
Mibi03g0288 310 CDD ACT_UUR-ACR-like 238 301 - -
Mibi03g0288 310 MobiDBLite consensus disorder prediction 25 62 - -
Mibi03g0288 310 CDD bHLH_AtbHLH_like 73 126 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0288 Mibi-ChrMibi03 3261894 3266317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0288 71 310 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 41.463 1.69e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi03g0288 HLH 7e-09 No_clan