Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0285 ATGTTCTTCTGCGAGTTCTTGTTCTATTATGGATTGCTGACATTTCTGGGGATGCAGCAGCTTCGTCTAACAATGGCAGATTGCCCTTTGGACATTAGTAAATCAAACTTCACACTAGCATCCTCTATGTGCTCTAACCAGGTTGAAAGAGGGCAATGTTGCCGCTACATTAATGCCAACATTGCAATTTCTGTTGCTCGTTTTGCAAATGCAACAAGAAGCCTTGGAGTCACCCCAAACACTTCTGAACTCTGTCTCCAAACCATATCTCAGACCTTGCAACATTATGGGGTTCCACAGAACACGACAATTTTCTGTGGTTTCGGCACAAAAATCTTGGTTAATTATGAGTGTGAGGGTCGAACTACAGTTGTGCAAATGCTGCAATCTCCCCGCTTTGCGCAGGTTGTGGAAAATTGTAAAGTGCCACTTGCTGAGGAAATTAAATGCAAGAAATGCTTAAATGCTGGCATTAATTTCATACATCATCTGATAGGCATTGTTGATAATATAACACTGAGTACATGCCGTGATGCCACCTTCACAGCATTGGCAAGCCAAGTTGATGAAATATCTTCCATTGATATTGCAAGCTGTTTCTTTGGGGTTCAAGGGCTTATCCAACCTCATGCTTCAGAGCCATCCCCACCATTGCCAACTCCTGAAGCTTCTCCTAGTCCACTGGTTGCTGATAGCCCAAGTCAGTCATTGTTAGGTGTACCTCCTAAGGGAAAGCATAGTTCATACCACTTGACAATCATTCCTGCTATTGGTATATCCGTCACAGTTGCTGCTGCTGTCATGCTATTGGTCTTGATTGTTCTGATTCATCGGAAAAAAAGAGAACTAGAGGGGCCTGATAACTTCAGTAAAGCCCCTTCAAAAGCTACACCTTCTTGTGCCATGTGGAAATTTCAGGAAGGTCCTCCATCTATGTTTCAAAAATTCAACTACAGGCAGATAAAGAAGGCAACAAAGGATTTCAGCACCATCATTGGACAAGGGGGATTTGGAACAGTATATAAAGCTCATTTCAGTAATGATCTTGTGTTAGCAGTAAAGAGAATGAACAAAATTTCAGAACAAGGGGAGGATGAATTTTGCAGAGAAATAGAGCTTCTTGCTCGGTTGCATCATCGGCATCTTGTTGCGTTACGAGGTTTTTGTGTTAAAAATCATGAGAGGTTTCTAATGTATGAGTACATGCAAAATGGAAGCTTAAAAGATCATCTTCATTCCCCTGGTAAAGCACCTTTAAGTTGGCGAACGAGAATCCAAATCGCCATTGATGTGGCTAATGCTCTGGAGTATCTCCATTTCTATTGTGATCCTCCTCTATGGCACAGGGACATAAAATCTAGCAACATTTTACTGGATGAGAATTTTGTTGCTAAGTTAGCTGATTTCGGTCTTGCACATGCTTCAAAAGATGGCTCCATATGCTTGGAAGCTGTAAACACCAATATCACGGGAACTCCAGGTTATATGGATCCTGAATATGTGGTTACTCATGAGCTGACTGAAAAAAGTGATATTTACAGTTATGGAGTATTATTGTTAGAAATTGTGACAGGAAGACGAGCGATTCAAGATAATAAAAATTTAGTTGAATGGGCACAGCCATACATGGGACCAGATTCTGTAACACGATCGATGGAGCTAGTGGATCCAAGTGTGAGGGAGTCTTTTGATTTGGATCAGCTCCAGACAGTAGTGTCTATAGTAGAATGGTGCACACAGAGAGAAGGCAGGGCCAGGCCTTCAATAAAACAAGTCCTTAGGCGTCTGTATGAGACATCAGAACCTATGCACAGTGGGTTTCTTGAAGATGAAGAATGTGAAGGGAATCAGCAGAGTGGAAGAAGAAGCAGAGGTAATATACACAGAAATGAAGCATTATTTCAGAGTGGGGAAGGAAGATATCTTGCTTCTTCTTCAAGTACATCGAGGTCATATTGCAGCAGAAGCTTTTTACTTGAGACAAGTTCCCCACAGTCTCCTTTGACTATATTATCCGTGGAAGACAAATTTCAATAG 2037 0.4158 MFFCEFLFYYGLLTFLGMQQLRLTMADCPLDISKSNFTLASSMCSNQVERGQCCRYINANIAISVARFANATRSLGVTPNTSELCLQTISQTLQHYGVPQNTTIFCGFGTKILVNYECEGRTTVVQMLQSPRFAQVVENCKVPLAEEIKCKKCLNAGINFIHHLIGIVDNITLSTCRDATFTALASQVDEISSIDIASCFFGVQGLIQPHASEPSPPLPTPEASPSPLVADSPSQSLLGVPPKGKHSSYHLTIIPAIGISVTVAAAVMLLVLIVLIHRKKRELEGPDNFSKAPSKATPSCAMWKFQEGPPSMFQKFNYRQIKKATKDFSTIIGQGGFGTVYKAHFSNDLVLAVKRMNKISEQGEDEFCREIELLARLHHRHLVALRGFCVKNHERFLMYEYMQNGSLKDHLHSPGKAPLSWRTRIQIAIDVANALEYLHFYCDPPLWHRDIKSSNILLDENFVAKLADFGLAHASKDGSICLEAVNTNITGTPGYMDPEYVVTHELTEKSDIYSYGVLLLEIVTGRRAIQDNKNLVEWAQPYMGPDSVTRSMELVDPSVRESFDLDQLQTVVSIVEWCTQREGRARPSIKQVLRRLYETSEPMHSGFLEDEECEGNQQSGRRSRGNIHRNEALFQSGEGRYLASSSSTSRSYCSRSFLLETSSPQSPLTILSVEDKFQ 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0285 678 MobiDBLite consensus disorder prediction 211 231 - -
Mibi03g0285 678 MobiDBLite consensus disorder prediction 212 226 - -
Mibi03g0285 678 CDD STKc_IRAK 332 596 - -
Mibi03g0285 678 SMART serkin_6 326 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0285 678 PANTHER OS01G0750732 PROTEIN 162 620 - -
Mibi03g0285 678 FunFam Putative receptor-like protein kinase 294 401 - -
Mibi03g0285 678 Pfam Protein kinase domain 330 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0285 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Mibi03g0285 678 MobiDBLite consensus disorder prediction 606 628 - -
Mibi03g0285 678 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Mibi03g0285 678 Gene3D Phosphorylase Kinase; domain 1 294 401 - -
Mibi03g0285 678 FunFam Putative receptor-like protein kinase 402 604 - -
Mibi03g0285 678 SUPERFAMILY Protein kinase-like (PK-like) 310 599 IPR011009 -
Mibi03g0285 678 Gene3D Transferase(Phosphotransferase) domain 1 402 615 - -
Mibi03g0285 678 ProSiteProfiles Protein kinase domain profile. 326 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0285 678 Pfam SPARK 26 169 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0285 Mibi-ChrMibi03 3222429 3226521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0285 23 672 Receptor kinase-like Gene Family AT3G19300 60.736 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Mibi03g0285 Pkinase 1.4e-49 CL0016