Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0284 ATGGCTGCCCTTAATAGACCAACAACAACAGTGTCTTCAGACTCCTTAGAACAGAAGGGGAAAAATATGGCCGAATCAACTGCCAACATGCTTCACTGCCCTTTGAACCAGCAGCCTCGTAGCTCTTTGGATGGCCCAGTGGCTATATTGTGGGATATTGAAAATTGCCCAGTTCCAAGTGATGTGCGCCCTGAAGATGTAGGTAATAATATAAGGATGGCTTTAAGGGTGCACCCAGTAATTAAAGGAGCTGTTATGATGTTTTCTGCTTATGGCGATTTCAATGCCTTCCCCCGGCGACTCAGAGAGGGCTGTCAGAGAACTGGTGTTAAACTCATTGATGTTCCCAATGGGAGAAAGGATGCTGCTGATAAGGCCATCTTGGTGGACATGTTCTTATTTGCCCTTGACAACCCTCCCCCTTCTTCCATCATGCTGATATCTGGGGATGTTGATTTTGCCCCAGCACTTCACATTCTTGGTCAACGTGGCTATACAGTTATTCTTGTCATCCCAGCTGGCGTGGGTGTTTCATCTGCCCTAAGTAATGCTGGAAAATTTGTTTGGGACTGGCCTAGTGTAGCTCGGGGTGAAGGCTTTGTGCCTCCCTCAAAGTCTTTAGGCCCACCTCGTATGAATCCAGCTGAGGTTGCTGGATACCTTATGGGGATCCATATCAATGACAATACTCATGGACAAAATGAAGAAGAAGCAATAATTTACAGAGGAATGTCACAGAGCTATTATAACTCTAGGGATTTCTCAGTTGTGTCACAATCTTTGTCTGAATACAACAGTAGCGCATTAAATGGGTCTTCTTTTCCAACAACTTTAAGGTCGCACAGCCTTCCTATTGTGTATAATGATGCTTCAGGAGGACCTATGTCTTCCACTGACCAAAATGAATTCCCATTGTGGGTACAACCTGGGGATTTAAATGGTCTCAAGGGCCAGTTGGTAAAGTTGCTTGAACTTTCAGGAGGATCCCTTCCTCTGACCCGTGTTCCAGCCGAGTACCATAAAGTTTTTGGGAGGCCTCTTTATGTATCAGAATATGGAGCATTCAAGTTAGTGAATCTTTTCAAAAAGATGAGTGACAGCATGTCTGTAGAAGGGAAGGGAAATCGGAAGTTTGTGTATCTTCGGAATTGGAAAGCAAGCCCCAGTGCACCTCCATTGGCTCTAGCACAGAAAGATAAGAAAGGGAGGGGGGCTCATGAGGAGAATGGGGATGTTGTCACCGGTGGATGCTCTTCAGATGAGTACTCAGATGAAGATAGAATAGTCATTGAAGGGCAGGATGAGAGAAGTGGCATAGGAAAGAGCCATCAGGGAAGAGCATCCAGATGTGAAATCGATGACAATCTTGAGCAGTTCAAGTATGAGCTAATGGAGATTCTAGTAAGCTATTCTTGCAGAATATTTCTGGGTTGTTTTGAAGCAATATACCGGCAAAGGTACAAGAAACCCCTGGAATATCAGAGATTTGGTGTGGGCAAGTTGGAGGATTTGCTTGGGAAAGTGAGCGATGTGGTGGAATTACACGAAGAACCAGGAAACAACAGGAAGTTCCTGGCTGCTGTGGGTGGGTAG 1593 0.4526 MAALNRPTTTVSSDSLEQKGKNMAESTANMLHCPLNQQPRSSLDGPVAILWDIENCPVPSDVRPEDVGNNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYTVILVIPAGVGVSSALSNAGKFVWDWPSVARGEGFVPPSKSLGPPRMNPAEVAGYLMGIHINDNTHGQNEEEAIIYRGMSQSYYNSRDFSVVSQSLSEYNSSALNGSSFPTTLRSHSLPIVYNDASGGPMSSTDQNEFPLWVQPGDLNGLKGQLVKLLELSGGSLPLTRVPAEYHKVFGRPLYVSEYGAFKLVNLFKKMSDSMSVEGKGNRKFVYLRNWKASPSAPPLALAQKDKKGRGAHEENGDVVTGGCSSDEYSDEDRIVIEGQDERSGIGKSHQGRASRCEIDDNLEQFKYELMEILVSYSCRIFLGCFEAIYRQRYKKPLEYQRFGVGKLEDLLGKVSDVVELHEEPGNNRKFLAAVGG 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0284 530 MobiDBLite consensus disorder prediction 390 421 - -
Mibi03g0284 530 CDD LOTUS 312 381 - -
Mibi03g0284 530 ProSiteProfiles OST-type HTH domain profile. 455 529 IPR025605 -
Mibi03g0284 530 Pfam OST-HTH/LOTUS domain 313 378 IPR025605 -
Mibi03g0284 530 Pfam OST-HTH/LOTUS domain 456 521 IPR025605 -
Mibi03g0284 530 CDD LOTUS 456 519 - -
Mibi03g0284 530 CDD PIN_limkain_b1_N_like 46 172 - -
Mibi03g0284 530 Pfam NYN domain 46 185 IPR021139 GO:0004540
Mibi03g0284 530 Gene3D - 42 192 - -
Mibi03g0284 530 MobiDBLite consensus disorder prediction 1 25 - -
Mibi03g0284 530 ProSiteProfiles OST-type HTH domain profile. 311 383 IPR025605 -
Mibi03g0284 530 PANTHER LIMKAIN B LKAP 22 487 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mibi03g0284 530 Gene3D - 311 380 IPR041966 -
Mibi03g0284 530 Gene3D - 451 526 IPR041966 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0284 Mibi-ChrMibi03 3219901 3221493 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0284 43 197 C2H2 Transcription Factor Family AT5G61190 41.290 2.30e-27 115