Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0260 ATGGTACCTTCAAATGTGCAGGAAGGATATTGGATGGGTATCCCTAAAAGTTTCTGTCAGGAGCATTTGCCCAAAGTTGATACTATGATTGTTTTGGAAGATGAGGATGGAAGAGAATTTGGAGCGAAATATCTTCCTCGTAAGAATGGTTTAAGTGGTGGATGGAGAAGATTTTCAAAAGATCACACATTGCAAGAGCATGATGTTTTAGTTTTCCATTTAGTCCAACCCACCAAGTTCAGGGTGTACATCATAAAATTAAACGAAGTGGACATTGCTCTTAGCCTTCTGCGTTTAGATGGTGGGTCTGATAATCAACATGATTCAGTAGATGTTCCTCAAAATGATGACTCAAACAACGACAGAATGATTTGTGATGATAACTCAGCACCATCTAATCAACTTGGAAACACAAGTGTAGAAGAAAATCTGGATCTTGAAGTTTTGAATGGGAATAGATTGGTGAGGTCTATGACCAATTTGCAAGAAATTTCAAGTATTGAAAATTTTAACATTGTGGTTAATGGCTCAGTAGTTGATGATTCTCAACTACCACAAGGCCTCAAAACTAGATACTATGACCTATGTTGCAGCCAGAAGATGATTCTTCATGAGAATCTCCTTGTAACTCAAAACTGTCAAATGGTCATCGGAATGATACATGAGATCACTACTATTGCCGATGCCATTAAAGCGAGCAAGATCACAACCCCATCCCATATTTTTGACCTTTGGTATAGAAAGTTAAAAGGTCTTGAAATATTAGGCATGAACGTTAGTTTCTTGCTTGCGAGGCTGGAGGGACTCATGAGATTGGCTTCAAAAACTAAGGAGTACAAAGAGGTAAGAAATCATCGAGAGCAAGCTGAAAAGGAAAAGAAAGTTCTTGAACGAAAGCTGGGGGAAGTGAAAAAGACCATAAGAAGGCTTGATGGCCAGATTGACTCCCTAATTCTGAATCTTCAGATGTTGGAGGCTGAGTTTCAAGGACTCACTAATGCTCCTTGGTGA 1011 0.3907 MVPSNVQEGYWMGIPKSFCQEHLPKVDTMIVLEDEDGREFGAKYLPRKNGLSGGWRRFSKDHTLQEHDVLVFHLVQPTKFRVYIIKLNEVDIALSLLRLDGGSDNQHDSVDVPQNDDSNNDRMICDDNSAPSNQLGNTSVEENLDLEVLNGNRLVRSMTNLQEISSIENFNIVVNGSVVDDSQLPQGLKTRYYDLCCSQKMILHENLLVTQNCQMVIGMIHEITTIADAIKASKITTPSHIFDLWYRKLKGLEILGMNVSFLLARLEGLMRLASKTKEYKEVRNHREQAEKEKKVLERKLGEVKKTIRRLDGQIDSLILNLQMLEAEFQGLTNAPW 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0260 336 Gene3D - 1 90 IPR015300 -
Mibi03g0260 336 ProSiteProfiles B3 DNA-binding domain profile. 1 88 IPR003340 GO:0003677
Mibi03g0260 336 SMART B3_2 1 88 IPR003340 GO:0003677
Mibi03g0260 336 CDD B3_DNA 1 86 IPR003340 GO:0003677
Mibi03g0260 336 Pfam B3 DNA binding domain 1 85 IPR003340 GO:0003677
Mibi03g0260 336 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 1 89 IPR044837 -
Mibi03g0260 336 Coils Coil 272 334 - -
Mibi03g0260 336 SUPERFAMILY DNA-binding pseudobarrel domain 1 88 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0260 Mibi-ChrMibi03 2919083 2920500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0260 1 146 B3 DNA Binding Superfamily AT3G19184 40.411 1.05e-28 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi03g0260 B3 2.9e-16 CL0405