Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0246 ATGGGTTCCCTTCCTCCACAACTGACCTTGGATTTGAGACCTTCTTTTGTCCCCAAAACCATCACCGATTTCCTTTCCCATCTTTCCTCCATTTCCAGTTCCCCTGATAATAAACTCTCCATGCTCCATGATTTTGTCAACAGATTGGAAGAAGAATCCAGAAAGATCGAAGCTTTTAGACGTGAGCTTCCTCTCTGTATGCTCCTCTTAAATGATGCGATTTTGGTTCTGAAGGAGGAATTGGAAAAATTCAGGAGACATGATTCTCAGCCTGTATTGGAAGAATTTATTCCCATGAGGAAAGAATGTGATCAGAAGGAGGTAAATGAAACAGAAAAGGAATGCCGAGATAAGAAGAATTGGATGAGTTCTGTACAACTCTGGAACACTACCTGTGAACAAAAGGAACATTGTAAATCAGAAACCAAGAAAAATGAAGAACAATGTTTTGTGGCAGAGGATCCTTTTAAATCTTCTAGAAATAGAATTGGAAGGAGAGTGTGTATGCCTTTTCCAACATATAGTTCAGTCCCTATGACAACTGTGACAACCAAGGAAGAAAAGGAAGAGTCTGATATTAATGGACTTTCTCTTGTCACTCCTGGGGTGAAAAATCTGAGGGAGGGGTCTGTTTCTAGTGGATCAAGAATATCATCATCTAGCAGGGCTGTTTCATCCCCTCCTTCTGGTGATCAACCAAGTTTACGCACTGGTCACCAACAGAGTGGTAGGAAACAAAGAAGGTGTTGGTCACCTGAGCTTCATCGCCGATTTGTCAATGCCCTGCAGCAACTTGGAGGTTCTCAAGCTGCCACTCCAAAGCAAATTAGAGAACTCATGCAAGTTGATGGCCTGACCAACGATGAAGTGAAGAGCCATTTACAAAAATACCGTCTTCATACCCGAAGACTTCCAGCTTCCACGGCTACACCCAGTAACCAGTCTGTTGTAGTTCTTGGGGGCTTATGGATGTCCCAAGATACTCAGTATAATGACTCCTCCAAGGGTAGCGTTTCAGGGTCAGGCTCTCCTCAAGGTCCCCTCCAGTTAAATTCAGGATGTGGGGGAGGAATGTCCCAAACTGAAGATGACAGCTTTGAAGATGATGAAGATGATGAAAAATCTAGAGAGCGATAG 1137 0.4327 MGSLPPQLTLDLRPSFVPKTITDFLSHLSSISSSPDNKLSMLHDFVNRLEEESRKIEAFRRELPLCMLLLNDAILVLKEELEKFRRHDSQPVLEEFIPMRKECDQKEVNETEKECRDKKNWMSSVQLWNTTCEQKEHCKSETKKNEEQCFVAEDPFKSSRNRIGRRVCMPFPTYSSVPMTTVTTKEEKEESDINGLSLVTPGVKNLREGSVSSGSRISSSSRAVSSPPSGDQPSLRTGHQQSGRKQRRCWSPELHRRFVNALQQLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRLPASTATPSNQSVVVLGGLWMSQDTQYNDSSKGSVSGSGSPQGPLQLNSGCGGGMSQTEDDSFEDDEDDEKSRER 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0246 378 MobiDBLite consensus disorder prediction 206 245 - -
Mibi03g0246 378 Gene3D - 244 302 - -
Mibi03g0246 378 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 244 302 IPR017930 -
Mibi03g0246 378 Coils Coil 42 62 - -
Mibi03g0246 378 MobiDBLite consensus disorder prediction 182 250 - -
Mibi03g0246 378 MobiDBLite consensus disorder prediction 330 378 - -
Mibi03g0246 378 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 20 375 IPR044787 GO:0003700|GO:0006355
Mibi03g0246 378 Pfam Myb-like DNA-binding domain 247 298 IPR001005 -
Mibi03g0246 378 FunFam Myb family transcription factor 244 302 - -
Mibi03g0246 378 MobiDBLite consensus disorder prediction 330 359 - -
Mibi03g0246 378 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 245 300 IPR006447 GO:0003677
Mibi03g0246 378 SUPERFAMILY Homeodomain-like 243 303 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0246 Mibi-ChrMibi03 2739042 2741040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0246 7 324 G2-like Transcription Factor Family AT2G03500 39.706 1.63e-63 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi03g0246 Myb_DNA-binding 6e-07 CL0123