Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0223 ATGCTGCGACCTTGCTTTCACAAGCTTATTTGTCCCTCCACGCTCAATTCCCGTCAGCTGATTATTCCAGATAATTTTCTGAGAAAATTTGGGGGTGATCTTTCTACAGTTGCTACCCTCGCTGTTCCAGATGGCAGTGTCTGGCGAGTAGGATTAAAAAGGTTGGGCAACAAATTCTGGCTCCTTGATGGCTGGCAAGAATTTGTTCAACGCTACTCCATTGGTGTTGGTTATTTGCTGGTATTCAGATATGAAGGCAAATCATCCTTCACTGTTCATATTTTCAATTTGGCTACTTGTGAGATAAATTACCAATCAAATGCACGAAGCAGTAATGAAGGGACTTTCTTTAAAAATCAGCATCTTAATTTTGATGATATTGAGGATGAAGAAGACTCCAGTGAATTATTAGATCCATCGCCTCCATCCCTCAGTCCTGGTGCATTGCAAAACAAGGCTTTATCTGGAACTCCAGCATTGCAGAATTTGTTCCATGGATCTAAACTTAACTCCATAAACTGGGGAGATGGGGGGAATTCCCTTTCTTCCAAGGGTCCCAATTCACAAGACAATCAATCAAGCAAAAACATAGGTGTCCAGTTTAATGCAGTTGAGTTCAAAAAGTCCACTGACGAGATAAAATTGCGTTTCTCTAATGAGGAAACGCAAAAAGTTAAAAAAACTACAAGAAAGAAGCGCAAAATGGATCATAATGGACAAGAGCCCTTAGCTCAACATGAAGAAGAGGGGGAAATGCGCTATAGATTTTATGAAAGTGCTTCAGCAAGAAAAAGAACTGTGACAGCTGAAGAAAGGGAAAGGGCAATTAATTCAGCAAAAGCATTTGAACCGGTGAATCCTTTCTGTCGGGTTGTCCTGCGACCCTCTTATTTATACAGGGGTTGCATAATGTATTTGCCATCCTGTTTTGCAGAAAAGCATCTGAATGAAGTTTCAGGATTCATTAAACTCCAGAGCCCTGATGGAAAACAGTGGCCTGTTCGCTGCCTTTACAAAGGAGGGAGAGCAAAGTTAAGCCAAGGGTGGTTTGAATTTACACTGGAAAATAATTTAGGCGAAGGTGATGTCTGTGTTTTTGAACTTCTTAGAATGAAAGAAATAGTGTTGAAAGTTACTTCATTTCGTGTCGCTGAGGAAGCAGGATTGATGAGCCCTCCTCCTATACATCAACTCCAAAACATCAGCCCAGCTAAACTGTTGAAAACTCCCATGTCACAAACCATCATGCCAGTGAAACTGATTAGGAACTAG 1272 0.4104 MLRPCFHKLICPSTLNSRQLIIPDNFLRKFGGDLSTVATLAVPDGSVWRVGLKRLGNKFWLLDGWQEFVQRYSIGVGYLLVFRYEGKSSFTVHIFNLATCEINYQSNARSSNEGTFFKNQHLNFDDIEDEEDSSELLDPSPPSLSPGALQNKALSGTPALQNLFHGSKLNSINWGDGGNSLSSKGPNSQDNQSSKNIGVQFNAVEFKKSTDEIKLRFSNEETQKVKKTTRKKRKMDHNGQEPLAQHEEEGEMRYRFYESASARKRTVTAEERERAINSAKAFEPVNPFCRVVLRPSYLYRGCIMYLPSCFAEKHLNEVSGFIKLQSPDGKQWPVRCLYKGGRAKLSQGWFEFTLENNLGEGDVCVFELLRMKEIVLKVTSFRVAEEAGLMSPPPIHQLQNISPAKLLKTPMSQTIMPVKLIRN 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0223 423 Gene3D - 2 100 IPR015300 -
Mibi03g0223 423 SUPERFAMILY DNA-binding pseudobarrel domain 283 382 IPR015300 -
Mibi03g0223 423 MobiDBLite consensus disorder prediction 128 152 - -
Mibi03g0223 423 SUPERFAMILY DNA-binding pseudobarrel domain 4 100 IPR015300 -
Mibi03g0223 423 ProSiteProfiles B3 DNA-binding domain profile. 5 98 IPR003340 GO:0003677
Mibi03g0223 423 Pfam B3 DNA binding domain 7 96 IPR003340 GO:0003677
Mibi03g0223 423 Pfam B3 DNA binding domain 292 380 IPR003340 GO:0003677
Mibi03g0223 423 PANTHER B3 DOMAIN-CONTAINING 4 372 - -
Mibi03g0223 423 Gene3D - 266 386 IPR015300 -
Mibi03g0223 423 MobiDBLite consensus disorder prediction 138 152 - -
Mibi03g0223 423 MobiDBLite consensus disorder prediction 175 197 - -
Mibi03g0223 423 ProSiteProfiles B3 DNA-binding domain profile. 289 384 IPR003340 GO:0003677
Mibi03g0223 423 MobiDBLite consensus disorder prediction 222 248 - -
Mibi03g0223 423 MobiDBLite consensus disorder prediction 234 248 - -
Mibi03g0223 423 CDD B3_DNA 287 382 IPR003340 GO:0003677
Mibi03g0223 423 SMART B3_2 289 384 IPR003340 GO:0003677
Mibi03g0223 423 SMART B3_2 6 98 IPR003340 GO:0003677
Mibi03g0223 423 CDD B3_DNA 4 96 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0223 Mibi-ChrMibi03 2338181 2341332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0223 1 383 B3 DNA Binding Superfamily AT3G18990 52.320 4.56e-126 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi03g0223 B3 9.1e-17 CL0405