Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0211 ATGGGGAAATCTCAGAGCACAGAGGAAGATTACTCCGATCAGGAGTATTTAGACTTCGATTCTAAGTTAATCTTTGTCACTGCCATGGGCCCCAAGATTAAGGTAATTACAGAGGAAACACTTCGAACCGCACAGGAAGAGGACTTGTGCAGAATAATGGAGATGCTATCAGTGAAAAAGTATCAAGCACGTAGACTACTTATTTTCCATAGGTGGGATATAGCGAAATTATTTGCTGAGTTTGTGAAAAAGGAGAGAACATTATTCTTTACTGAAGCTGGTGTTAGCGAAGAAGAATACTGTGATTCAGGGTCATCAGCTGCTTCTTCAATAATGTGTGAAATCTGCATGGAGGATGTTCCTTGTGATCAAGCAACAAGAATGGACTGTAGTCACTGTTTTTGCAACGACTGTTGGAGAGAACATTTCATTGTCAAGATAAATGAAGGTCAAAGTAGGCTAATTAGATGCATGGCATACAAATGCAAATGTTTTTGCGATGAGGATGTTGTAAGGGCACTAGTGAGCCAAAAGAGCTGTGATATGGCAGAGAAATTTGAACGTGTTCTTCTCGAATCCTACATTGAAAACAACAAAAGAGCCAAGTGGTGCCCCAGTAGTCCTCACTGTGGGAATGCCATCTATGTTGAGGATGATGATGGATTATGTTTATGTGAGGTGGAATGTGCATGTGGTTTTCAATTCTGTTTTGGATGTTTGTCAGAACCACATTTGCCTTGTTCGTGTTTGATGAGGGAACTTTGGGCTGAAAAGTGTCAGGATGAACATTCTGCTAATTGGATAAAGAACAACACAAAATCTTGTCCAGATTGCCAAAAATTAGTGTACAAGGACGGTGGTTGTACCATGGTTACCTGTATTTGTGGCAAAACGTTCAGTTGGCGGGCTGATGGTGACCACAAAGACCAAGAGGAAAAGGGTAAAGAACCAGAGCAGGATGAAAGGCGTTATGCATACTATTATGATCGTTATATAGATCATATAATGAAATCTTTAGATAAAGATTGTAGATTGTTAGAATCTATAGGAAATAAGATTTCTTACCCCAGATTTTGCAGTTGGTTGGATGGACTCTCCACCCTTATGAGGTCTAGGCAGTTCCTATCATGCACATATCCTTTTGCATTTTATATGTTCAAGGATGGGATGTCAGACGAGGAAATGAAAACAAAGCACGGCCTTTTTGAGCATTATCAGCAACAGCTTGAAAAAATGGTTGAGAGGCTCTATAAAATCTTGAAATATCCCTTTGGAAGTGATATAATAATGCAGATTGCCGATTTGTCAGCATGTAATGACAGGCGTTGTAAGGCAATGTAA 1341 0.3975 MGKSQSTEEDYSDQEYLDFDSKLIFVTAMGPKIKVITEETLRTAQEEDLCRIMEMLSVKKYQARRLLIFHRWDIAKLFAEFVKKERTLFFTEAGVSEEEYCDSGSSAASSIMCEICMEDVPCDQATRMDCSHCFCNDCWREHFIVKINEGQSRLIRCMAYKCKCFCDEDVVRALVSQKSCDMAEKFERVLLESYIENNKRAKWCPSSPHCGNAIYVEDDDGLCLCEVECACGFQFCFGCLSEPHLPCSCLMRELWAEKCQDEHSANWIKNNTKSCPDCQKLVYKDGGCTMVTCICGKTFSWRADGDHKDQEEKGKEPEQDERRYAYYYDRYIDHIMKSLDKDCRLLESIGNKISYPRFCSWLDGLSTLMRSRQFLSCTYPFAFYMFKDGMSDEEMKTKHGLFEHYQQQLEKMVERLYKILKYPFGSDIIMQIADLSACNDRRCKAM 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0211 446 Pfam IBR domain, a half RING-finger domain 184 249 IPR002867 -
Mibi03g0211 446 SUPERFAMILY RING/U-box 267 308 - -
Mibi03g0211 446 SUPERFAMILY RING/U-box 184 255 - -
Mibi03g0211 446 FunFam RBR-type E3 ubiquitin transferase 107 198 - -
Mibi03g0211 446 Pfam Ariadne domain 308 446 IPR045840 -
Mibi03g0211 446 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 198 IPR013083 -
Mibi03g0211 446 SUPERFAMILY RING/U-box 110 196 - -
Mibi03g0211 446 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 87 344 IPR031127 GO:0004842|GO:0016567
Mibi03g0211 446 Gene3D - 245 446 - -
Mibi03g0211 446 ProSiteProfiles TRIAD supradomain profile. 109 332 IPR044066 -
Mibi03g0211 446 SMART ibrneu5 184 249 IPR002867 -
Mibi03g0211 446 SMART ibrneu5 257 309 IPR002867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0211 Mibi-ChrMibi03 2205975 2208783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0211 53 446 ARIADNE family AT2G16090 50.000 1.15e-128 379