Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0184 ATGAATCCTTGGGGACAACCGCCGGCGCAGTTCTCGGGGAACATGAACAGCGGTGGGGTGAGCAGCGCGAGCTATTCGGGGCCGGTGGGACCGCCGCCGCCTCCGCCACACCCGGGGGTGGCACTAGGGTTCAACAAGAGCACATTCACATATGAAGAGCTAACGGCTGCAACAAATGGGTTTTCCCAAGCGAACTTACTTGGACAAGGTGGATTTGGTTATGTGCACAAAGGAGTGTTGCCTAATGGGAAGGAAATAGCTGTGAAGAGTTTGAAATCAACCGGAGGGCAAGGTGATAAAGAGTTTCAAGCTGAGGTTGATATTATTAGCAGAGTTCATCATCGCCATCTTGTTTCTCTTGTTGGTTATTGTATTCAAGAAGGTCGTAGTCTTTTGGTCTATGAGTTTGTGCCTAACAAAACTATGGAATATCATCTTCATGGAAAGGACCGACCTGTTATGGATTGGCCTACTAGGCTCAAAATTGCTATTGGAGCGGCCAAGGGACTTGCTTACTTACACGAGGATTGCCACCCTCGAATCATTCACCGTGACATAAAGGGCGCAAACATTCTAATCGAAAACAACTTTGAAGCCAAGGTGGCAGATTTTGGATTGGCAAAACTCACACAAGACAACAACACCCATGTTTCCACCCGTGTAATGGGAACATTCGGGTATTTGGCTCCAGAGTATGCTTCAAGTGGCAAATTAACTGAGAAGTCCGATGTCTTTTCATACGGTATCATGCTTCTTGAGCTCATAACAGGACGACCTCCCGTTGACACCACTGGAGAATATGAAGAGGACAGTTTAGTTGACTGGGCAAGACCTCTGTGCATAAGGGCGATGGAAACTGGAAACTTTGAAGGTCTGGTAGATCCAAGACTAGGCAACAATTATGATATGCCAGAGTTGGCTCGTATGGTGGCCTGTGCTGCTTCCAGTGTTAGGCACTCTGCAAGAAGAAGACCAAAAATGAGCCAAATAGTACGAGCATTGGAGGGAGATGTGTCACTAGATGATCTGAGCGAGGGGGTAAAGCCAGGGCAAAGTTCAATGTTCACAAACAATAGTATGGAGTATGATGCAAGCACATACAGTGCAGACATGAAGAGGTTCAGGAAGCTTGCATTTGATAGTAGCTACGCAAGCAGTGATTTTGGCCAAACCAGTGAGTATGGCCTCAACCCTTCCTCCTCTAGCAGCGAAGCCGACCGCTCTTCTGAATTCTCCAAATCGTCCCTCAACAAATAA 1257 0.4733 MNPWGQPPAQFSGNMNSGGVSSASYSGPVGPPPPPPHPGVALGFNKSTFTYEELTAATNGFSQANLLGQGGFGYVHKGVLPNGKEIAVKSLKSTGGQGDKEFQAEVDIISRVHHRHLVSLVGYCIQEGRSLLVYEFVPNKTMEYHLHGKDRPVMDWPTRLKIAIGAAKGLAYLHEDCHPRIIHRDIKGANILIENNFEAKVADFGLAKLTQDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSYGIMLLELITGRPPVDTTGEYEEDSLVDWARPLCIRAMETGNFEGLVDPRLGNNYDMPELARMVACAASSVRHSARRRPKMSQIVRALEGDVSLDDLSEGVKPGQSSMFTNNSMEYDASTYSADMKRFRKLAFDSSYASSDFGQTSEYGLNPSSSSSEADRSSEFSKSSLNK 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0184 418 ProSitePatterns Protein kinases ATP-binding region signature. 67 89 IPR017441 GO:0005524
Mibi03g0184 418 Gene3D Transferase(Phosphotransferase) domain 1 137 345 - -
Mibi03g0184 418 SUPERFAMILY Protein kinase-like (PK-like) 39 334 IPR011009 -
Mibi03g0184 418 FunFam proline-rich receptor-like protein kinase PERK1 39 136 - -
Mibi03g0184 418 Pfam Protein tyrosine and serine/threonine kinase 64 332 IPR001245 GO:0004672|GO:0006468
Mibi03g0184 418 ProSiteProfiles Protein kinase domain profile. 61 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0184 418 MobiDBLite consensus disorder prediction 1 41 - -
Mibi03g0184 418 MobiDBLite consensus disorder prediction 385 418 - -
Mibi03g0184 418 MobiDBLite consensus disorder prediction 1 24 - -
Mibi03g0184 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Mibi03g0184 418 Gene3D Phosphorylase Kinase; domain 1 40 136 - -
Mibi03g0184 418 SMART serkin_6 61 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0184 418 FunFam Proline-rich receptor-like protein kinase PERK1 137 345 - -
Mibi03g0184 418 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 37 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0184 Mibi-ChrMibi03 1940671 1944210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0184 45 393 Trihelix Transcription Factor Family AT5G38560 60.969 1.41e-153 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mibi03g0184 PK_Tyr_Ser-Thr 6.5e-46 CL0016