Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0179 ATGGCCTCCGACGACTCTTCTGGTCATGGTATTACACAGCTCACCAAAAAAACCCCATTTCTTGGTTTAAAGCTTTACTGCGTGATCGCCATTTTCGTTCTAATCGTTCTGGGTATGTTGCTTTTGATCTTCTTGTGCTTTCGCCGGAGTCGAATCTCAACGAAGCGTAAATTGCGAGTGAAGCATAGTTCTGGGACGATCCCTTTGGTGTCAAAGGAGATCGTGGAAGTAAAAAGTTTGGATCTTGAGCAGAATTATGAGGAGGCAGCGGAGATTAAAATTGGGGATGAGGATCTGAAGAAGAAGAAGGAGAAGGAGAAGGTTGAGATTGAGGTTGAGGTTGAGGGAAGAGGGAAGAAGACGAGTGATGGGAGTGACGTGTCCGTTGGGAATCGTAGTGACGTGTCGGTGGACGCGCCGAACATTGGGTGGGGCCGGTGGTATAGCTTGAGGGAGCTGGAGGATGCGACACGTGGATTTGTGGAAGAAAGTGTGATCGGTGAAGGAGGGTATGGTATTGTGTACAAGGGTGTTCTTGAAGATGGGTCTGTGGTGGCTGTGAAGAATCTTCTGAATAACAAGGGTCAAGCAGAGAAGGAGTTTAAGGTGGAGGTTGAAGCCATTGGAAAAGTAAGGCATAAGAATTTGGTGGGTTTAGTTGGATATTGCGCAGAAGGACCTCAAAGGATGCTTGTTTATGAATTTGTTGATAATGGAAATTTGGAGCAGTGGTTGCATGGTGATGTTGGAACTGTTAGTCCCTTGACATGGGATATACGGATGAAAATTGCCATTGGGACAGCAAAAGGGCTGGCCTATCTGCATGAAGGGTTAGAACCCAAAGTGGTGCACCGAGATATAAAATCCAGTAACATTCTTTTGGACAGAAAGTGGAATGCTAAAGTATCAGACTTTGGACTAGCCAAGCTATTAGGCTCTGAGAAGACCTATGTGACCACACGTGTAATGGGGACATTTGGATATGTTTCACCCGAGTATGCAAGCACAGGAATGCTTAATGAGGGAAGTGATGTGTATAGCTTTGGAGTTCTGCTCATGGAAATAGTTACAGGAAGAAGTCCTATTGATTATTCTAGACCACCTGGAGAGATGAATTTGATTGATTGGTTCAAGGGAATGGTAGCAAGTCGTCGTGGTGAAGAGCTGGTAGATCCTTTGATTGAGGTTCAACCCTCTCCAAGATCTTTGAAACGAGCTTTGCTGGTTTGCCTGCGCTGTATAGATTTGGATGTTAGTAAACGACCAAAGATGGGTCAAATCGTTCATATGCTTGAGGCAGATGATTTCCCCTTTCGTTCTGAACTTCGCACAATAAGAGAGAAAGATTCTGCTCCTTCGCCGCATCCCACAATTCCCCGCAGAGTTCAATATCCCCCTAAGAATGAGGATTCTGTAGAACAATCTAGATGGAGATGA 1437 0.4516 MASDDSSGHGITQLTKKTPFLGLKLYCVIAIFVLIVLGMLLLIFLCFRRSRISTKRKLRVKHSSGTIPLVSKEIVEVKSLDLEQNYEEAAEIKIGDEDLKKKKEKEKVEIEVEVEGRGKKTSDGSDVSVGNRSDVSVDAPNIGWGRWYSLRELEDATRGFVEESVIGEGGYGIVYKGVLEDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCAEGPQRMLVYEFVDNGNLEQWLHGDVGTVSPLTWDIRMKIAIGTAKGLAYLHEGLEPKVVHRDIKSSNILLDRKWNAKVSDFGLAKLLGSEKTYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGVLLMEIVTGRSPIDYSRPPGEMNLIDWFKGMVASRRGEELVDPLIEVQPSPRSLKRALLVCLRCIDLDVSKRPKMGQIVHMLEADDFPFRSELRTIREKDSAPSPHPTIPRRVQYPPKNEDSVEQSRWR 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0179 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 282 294 IPR008271 GO:0004672|GO:0006468
Mibi03g0179 478 Pfam Protein kinase domain 161 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0179 478 ProSitePatterns Protein kinases ATP-binding region signature. 166 188 IPR017441 GO:0005524
Mibi03g0179 478 CDD STKc_IRAK 166 432 - -
Mibi03g0179 478 Gene3D Transferase(Phosphotransferase) domain 1 236 443 - -
Mibi03g0179 478 FunFam Probable serine/threonine-protein kinase At1g01540 140 235 - -
Mibi03g0179 478 SMART serkin_6 160 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0179 478 PANTHER OS01G0323000 PROTEIN 12 448 - -
Mibi03g0179 478 FunFam Putative receptor-like serine/threonine-protein kinase 236 446 - -
Mibi03g0179 478 MobiDBLite consensus disorder prediction 446 478 - -
Mibi03g0179 478 SUPERFAMILY Protein kinase-like (PK-like) 134 432 IPR011009 -
Mibi03g0179 478 ProSiteProfiles Protein kinase domain profile. 160 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0179 478 Gene3D Phosphorylase Kinase; domain 1 136 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0179 Mibi-ChrMibi03 1895685 1898649 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0179 140 432 Receptor kinase-like Gene Family AT4G02010 48.148 3.59e-93 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Mibi03g0179 Pkinase 3.1e-46 CL0016