Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0174 ATGGTGGATCGTAGGCGAAACATAGTTTCTCTTGGGTTCTTGTTCTTGTTGCTTTTTCAGTTCACATTTGAACAGCTTGAGCCACTGAGTTCACCCACTGAGCGACTCGCCCTACTTCAACTTCGATCTTCCTTAGGCTTGAGAAGTAGGGAATGGCCAATAAAAGCCGACCCTTGCTTAATATGGAATGGTGTGAGATGTGAGAATGGTAGAGTCATTGGGATCAATGTTTCTGGGTTTACAAGAACAAGACTTGGGAGGCAAAACCCACAATTCAATGTTGATGCTTTAGCTAACTTGACCTTCCTACAATCCTTCAATGCGTCCAAGTTTCTTCTTCCTGGTCCTGTTCCTCAATGGTTTGGCCTAAAGCTTTCTTCACTCAGAGTTCTTGATCTTCGTTCTTGCTCCATCACTGGTGCAATTCCTTCTACTCTTGGGAATCTGACAAGCCTAACCACTCTCTATTTATCTCATAATAACCTCACTGGGATCATTCCTGATAGTCTAAGTCAACTTTTGGCCCTTTCTGTTCTTGATCTTTCCCGGAATTTTCTCTCAGGATCATTGCCCACATCCCTTGCCTTCCTCGGGAATCTTTCTTTCCTTGATATTTCTTCCAACTATTTATCTGGGTCAATTCCCCAAGGCATTGGCTCACTTTCTAAGTTACAACTTTTGAATCTTTCAAACAATGGTCTTACTTCTTCTATACCTGCTCAACTTGGGGACCTTAGTAACCTAGTTGACCTTGATCTTAGTAACAATTCCTTGTACGGTCTGGTGCCTCAGGAATTAATGGGGTTGAGGAACTTGCAGAGAATGAAGCTTGGGAACAACATTCTTGATGGACCTTTGCCAGAGAACTTGTTTCAAACTACATCTCAATTGCAGTTCATAGAGCTGAGACAAAATAATTTCACGGGGGACTTGCCTGATGAGTTGTGGTATCTTCCGAGATTGCGCTTTGTGGATGTCTCCAGTAATAACTTCACTGGTGTGCTTCCTAGTTCTAGGTTTACTGCTAATGCCACTCATACGGTTAGGGGCAATATTTCTCATAATCTATTTTATGGAAGGATCACTCCTCTGCTCAAAAGGTTCGGTTTCATTGATTTGTCTAGCAATTATTTTGAGGGCAAGGCTCCGGATTATGCAGTTAATGCTTCAATGGGTAGCAACTGCCTCCAAAATGTAACAAATCAGAGGAAAAGAGAAGAATGCATCTCATTCTATTCCAAGAAAGGCCTCTCTTTTCATAATTTCGGGCAAGCAAGCAATCCAAACATGACAAGAACTCGTGCGGCAGAAAGCTCTGGGAAGAACAATAGAAGAAAAATTGTTCTAGCAGGAATTTTGGGTGGACTTGGTTTGATTGTGGTTTTGTTGTTGTTTGTTCTGTTTACTTGTAAGCGGAGTAAATCATATAATACAGGAACTGGTGTGGGTGCTGCTCTTGCTGGAGGCAGTACTGCACCTGCCCATGCATTGATAGAATTACCAAAAGTAGGAGACTCATTTACATATCAGCAAATGCTCAAGGCTACAGGTGATTTCAGTGATGCAAATCTTATAAAAAATGGTCACACGGGTGATCTCTTCAATGGTGTTTTGGAAAGTGGGATATCTGTGGTGATAAAAAGGATTGATTTGCATTCAACTAAAAGTGAGAATGCTTACATCTCGGAATTGGAACTTTTCAGTAAGGTTTCTCATACAAGATTGGTTCCCCTGTTGGGTCATTGCTTAGAAAATGACAAAGAGAAGCTCCTGGTTTATAAACATATGCCAAATGGGGACTTGTTGAATTGCTTGCACAACCGAGTTATTACATATGAAGATGGTACATTGCAGTCAATGGATTGGATAACAAGATTGAAAATTTCTATTGGAACTGCGGAGGCCCTATGTTATCTACATCATGAATGCAATCCACCCTTTGTTCACAGAGATATTCAATCTACCAGTATACTTCTAGATGAGAAATATGAAGTTCGGTTAGGGAGTCTAAGTGAAGTCTGCACTCAGGAAGGTGATACTCATCAAAGGAAGATCTCAAGGTTGCTACGGTTACCTCAGTCATCTGATCAAGGCTTATCTGGTTCATCACCAGCAGTTTGCTCCTATGATGTCTATTGCTTTGGGAAAATATTGCTTGAGATGGTAACTGGTAAACTGGGAATTAGTGCATCTGATGATGCAGAAGTAAATGAATGGTTGGAACAGACACTACCTTTCATTAGTATTTATGACAAGGATCTTGTAACCAAGATTGTGGATCCATACATGGTTGTTGATGAGGATTTCTTAGAGGAAGTGTGGGCAGTGGCCATCATTGCGAGGTCTTGCCTGAATCCTAAAGCTTCAAGACGGCCCCAGATGAGATTTGTCCTCAAGGCTCTTGAAAACCCTCTAAAAGTCACAAGGGAAGAGAGTTACAGTAGTTCTGCAAGGCTAAGAGCAACTTCTTCCAGAGGCTCTTGGAATGCTGCTTTATTTGCTAGTTGGCGTCAGAATTCTGATGTGACAGTAGTTCCGGAAGCTTCTGGTGCACTAAGAGGTGAAGAAGGCGGCGATGTTTCATGGTCCCACCGGCGTTATTCGAATGAGATAGTTCCAGAACCATCTAGCAAAGCCATCTTCGTTCTTCACACCACATTGGAAATGCTTTCATGTCAAAAATACCACTTTCACTCTCCATGCTCTTTCATTCTCCAATCCCTCTTCTCCACCCCAACTTCCACCATTGTCAACTGCCAAAATCCACATGGCCCCCCAGATTCTCACAACCTCATTCTCCGCAAGCAGAATTCCAAATCCACCTCCTTTCTCCTTCACCAACTATCTCCCCACCAACAAGAAGAAGAAGAAGAAGAAGAAGAAACCCATCATCCTTCCCATCAATTCAATCTCAATTCCAGTGACCTTCAACAACACGACATGCCCCATGAAGAAAAGATTAAACTTTTAGAGCTTTCCCTTGTAAGGAGAAGAACCCCTCAATTTCCTGGGTCCATTTATGTTCAATCTCCTAGTGATCGCGATGTGGGTTCTTCTTTGCCGCCTCTAAGAACTCTGTTTAAGGAACAGGTTGATGGTGAAGGTGAGGATGAGGAGGAGATTATAATGCGTGCGATTGAGATTCGAAGGAAGGTTACGAGAGAGATTTTGTTGGAAGCAATGAGAAAGGGGAAGTTTGGAATCACTTACGCTACTAATTTGGTTAATCGATTGACTGGTTTTATTGATTATGTCATGATTGAAGCTGCTTCCATGAAAAGAATTCCTCAGTTTTCGCATTCTACTTTCAATTTACGCGCCAAAACTGTCATAGATGACTTACAAGTTGTGCCTCTTATCAGATGGTTGAAGCATAATGCACTGTCATATCATCGGATATCAAAGCTTATTTTGATGTCAAGAGGAAACCTTGAGTCTATAAGACGTCTTGCTGAGTGGTTGAGGTCAGTACACGTGAAAGGAGAATTTCTTGGGGTTACACTTGTGAATGCTGGAGATAATATTCTGGAACGCAGCAATGAGGAATTGGATGAGATTGTTAAGTATTTAGAGAGCAAGGGAATTAGGAGGGATTGGATGGGTTATGTCATAAGCCGATGTCCTCAATTGTTATCTTACAGCTTGGAAGAAGTGCAGACTCGCGTGGAATTCTACCTAGATATGGGTTTAAATGATCACGATTTTGGCACAATGGTTTTTGATTATCCTAAAGTTCTTGGTTACTTTACTCTAGAAGAAATGAATCAAAAGGTTAATTACTTAAAGGAGTTTGGGCTCAAAACTGAGGATGTTGGCAGGTTGGTAGCATTTAAGCCGCATTTGATGGGATGTAGCATTGAAGACGGATGGAAGCCTCTTGCTAAGTATTTGTATTATTTTGGGGTTACCAGAGATGGTATGAGGAGAATGCTTATGATCAAACCAATGGTCTTCTGTATTGATTTGCAGACAAATATTGTGCCCAAGGTAAAATTTTTCCAGGATCTAGGGATTCGAGATGATGCAATTGGAAACATGCTTGTGAAGTTTCCTACTCTGCTCACATACAGCCTCTACAAGAAGATTAGGCCAGTGGTCATATTCTTGATGACCAAGGCTGGGGTCAGTGATGAAGATATTGCAAAGACTATTGCTCTGGGACCAGAGCTCTTGGGATGCAGCATAACGCAGAAGCTTGAAGTGAGTGTAAAATATTATCTGTCACTTGGCATACGTCTCAAGCAATTGGGTGAGATGGTTGCAGATTTCCCAATGCTTCTTAGATACAACATTGATATCCTTCGTCCCAAGTATACTTATTTGCGGCGAACCATGGTCCGACCATTGGAAGATCTCATTGAGTTTCCAAGGTTTTTTAGTTATTCTCTCAATGGTCGAATCATTCCAAGGCACAAGGTTCTGGTGGAAAATCGGATTAATTTGAAGCTGCGTTACATGTTGGCTTGTTCTGATGAAGAATTCAGGAAATTGGTTGACTCTCAAATTAGAAAGCGACAAACACTGCTATCTGCAGGCACGAGTGCTGATGTTACGGATCCTCACACATGA 4569 0.4167 MVDRRRNIVSLGFLFLLLFQFTFEQLEPLSSPTERLALLQLRSSLGLRSREWPIKADPCLIWNGVRCENGRVIGINVSGFTRTRLGRQNPQFNVDALANLTFLQSFNASKFLLPGPVPQWFGLKLSSLRVLDLRSCSITGAIPSTLGNLTSLTTLYLSHNNLTGIIPDSLSQLLALSVLDLSRNFLSGSLPTSLAFLGNLSFLDISSNYLSGSIPQGIGSLSKLQLLNLSNNGLTSSIPAQLGDLSNLVDLDLSNNSLYGLVPQELMGLRNLQRMKLGNNILDGPLPENLFQTTSQLQFIELRQNNFTGDLPDELWYLPRLRFVDVSSNNFTGVLPSSRFTANATHTVRGNISHNLFYGRITPLLKRFGFIDLSSNYFEGKAPDYAVNASMGSNCLQNVTNQRKREECISFYSKKGLSFHNFGQASNPNMTRTRAAESSGKNNRRKIVLAGILGGLGLIVVLLLFVLFTCKRSKSYNTGTGVGAALAGGSTAPAHALIELPKVGDSFTYQQMLKATGDFSDANLIKNGHTGDLFNGVLESGISVVIKRIDLHSTKSENAYISELELFSKVSHTRLVPLLGHCLENDKEKLLVYKHMPNGDLLNCLHNRVITYEDGTLQSMDWITRLKISIGTAEALCYLHHECNPPFVHRDIQSTSILLDEKYEVRLGSLSEVCTQEGDTHQRKISRLLRLPQSSDQGLSGSSPAVCSYDVYCFGKILLEMVTGKLGISASDDAEVNEWLEQTLPFISIYDKDLVTKIVDPYMVVDEDFLEEVWAVAIIARSCLNPKASRRPQMRFVLKALENPLKVTREESYSSSARLRATSSRGSWNAALFASWRQNSDVTVVPEASGALRGEEGGDVSWSHRRYSNEIVPEPSSKAIFVLHTTLEMLSCQKYHFHSPCSFILQSLFSTPTSTIVNCQNPHGPPDSHNLILRKQNSKSTSFLLHQLSPHQQEEEEEEEETHHPSHQFNLNSSDLQQHDMPHEEKIKLLELSLVRRRTPQFPGSIYVQSPSDRDVGSSLPPLRTLFKEQVDGEGEDEEEIIMRAIEIRRKVTREILLEAMRKGKFGITYATNLVNRLTGFIDYVMIEAASMKRIPQFSHSTFNLRAKTVIDDLQVVPLIRWLKHNALSYHRISKLILMSRGNLESIRRLAEWLRSVHVKGEFLGVTLVNAGDNILERSNEELDEIVKYLESKGIRRDWMGYVISRCPQLLSYSLEEVQTRVEFYLDMGLNDHDFGTMVFDYPKVLGYFTLEEMNQKVNYLKEFGLKTEDVGRLVAFKPHLMGCSIEDGWKPLAKYLYYFGVTRDGMRRMLMIKPMVFCIDLQTNIVPKVKFFQDLGIRDDAIGNMLVKFPTLLTYSLYKKIRPVVIFLMTKAGVSDEDIAKTIALGPELLGCSITQKLEVSVKYYLSLGIRLKQLGEMVADFPMLLRYNIDILRPKYTYLRRTMVRPLEDLIEFPRFFSYSLNGRIIPRHKVLVENRINLKLRYMLACSDEEFRKLVDSQIRKRQTLLSAGTSADVTDPHT 1522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0174 1522 Pfam Leucine rich repeat 127 184 IPR001611 GO:0005515
Mibi03g0174 1522 Pfam Leucine rich repeat 223 280 IPR001611 GO:0005515
Mibi03g0174 1522 Gene3D Phosphorylase Kinase; domain 1 490 595 - -
Mibi03g0174 1522 Pfam mTERF 1187 1494 IPR003690 GO:0003690|GO:0006355
Mibi03g0174 1522 Pfam mTERF 1146 1226 IPR003690 GO:0003690|GO:0006355
Mibi03g0174 1522 MobiDBLite consensus disorder prediction 950 966 - -
Mibi03g0174 1522 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 23 802 - -
Mibi03g0174 1522 Pfam Protein tyrosine and serine/threonine kinase 525 762 IPR001245 GO:0004672|GO:0006468
Mibi03g0174 1522 MobiDBLite consensus disorder prediction 947 974 - -
Mibi03g0174 1522 SMART mt_12 1344 1376 IPR003690 GO:0003690|GO:0006355
Mibi03g0174 1522 SMART mt_12 1449 1480 IPR003690 GO:0003690|GO:0006355
Mibi03g0174 1522 SMART mt_12 1417 1447 IPR003690 GO:0003690|GO:0006355
Mibi03g0174 1522 SMART mt_12 1201 1231 IPR003690 GO:0003690|GO:0006355
Mibi03g0174 1522 SMART mt_12 1236 1267 IPR003690 GO:0003690|GO:0006355
Mibi03g0174 1522 SMART mt_12 1166 1196 IPR003690 GO:0003690|GO:0006355
Mibi03g0174 1522 SMART mt_12 1272 1303 IPR003690 GO:0003690|GO:0006355
Mibi03g0174 1522 SMART mt_12 1308 1339 IPR003690 GO:0003690|GO:0006355
Mibi03g0174 1522 SMART mt_12 1381 1412 IPR003690 GO:0003690|GO:0006355
Mibi03g0174 1522 Gene3D Ribonuclease Inhibitor 194 404 IPR032675 -
Mibi03g0174 1522 Gene3D Transcription termination factor 3, mitochondrial 1277 1501 IPR038538 -
Mibi03g0174 1522 Gene3D Transferase(Phosphotransferase) domain 1 596 824 - -
Mibi03g0174 1522 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 31 190 - -
Mibi03g0174 1522 ProSiteProfiles Leucine-rich repeat profile. 151 172 IPR001611 GO:0005515
Mibi03g0174 1522 SUPERFAMILY Protein kinase-like (PK-like) 501 801 IPR011009 -
Mibi03g0174 1522 Gene3D Ribonuclease Inhibitor 31 193 IPR032675 -
Mibi03g0174 1522 SUPERFAMILY L domain-like 96 379 - -
Mibi03g0174 1522 FunFam Putative LRR receptor-like serine/threonine-protein kinase 596 822 - -
Mibi03g0174 1522 FunFam Leucine-rich repeat receptor protein kinase EMS1 191 289 - -
Mibi03g0174 1522 FunFam Predicted protein 489 595 - -
Mibi03g0174 1522 ProSiteProfiles Protein kinase domain profile. 519 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0174 1522 SMART LRR_typ_2 245 268 IPR003591 -
Mibi03g0174 1522 SMART LRR_typ_2 173 196 IPR003591 -
Mibi03g0174 1522 SMART LRR_typ_2 221 244 IPR003591 -
Mibi03g0174 1522 SMART LRR_typ_2 125 148 IPR003591 -
Mibi03g0174 1522 SMART LRR_typ_2 318 341 IPR003591 -
Mibi03g0174 1522 SMART LRR_typ_2 197 220 IPR003591 -
Mibi03g0174 1522 SMART LRR_typ_2 269 293 IPR003591 -
Mibi03g0174 1522 SMART LRR_typ_2 149 172 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0174 Mibi-ChrMibi03 1835224 1842818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0174 33 693 Miscellaneous Gene Families AT2G16250 55.142 0.0 693
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Mibi03g0174 mTERF 3.2e-66 No_clan
TR mTERF Mibi03g0174 mTERF 3.2e-66 No_clan