Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0173 ATGGCGTCTGCTGATGTTGAGTACAGGTGCTTCGTCGGTGGCCTCGCATGGGCTACCGACAGTGATGCCCTTGAGAAGGCCTTCTCTCCCTTCGGTGAAATCGTCGAATCGAAGGTTATTAACGATCGTGAGACTGGAAGGTCAAGAGGTTTCGGATTCGTGACCTTCTCATCTGAGCAGGCTATGAGAGATGCGATCGAAGGAATGAACGGTCAGGATCTCGACGGCCGTAACATCACTGTGAACGAAGCTCAATCACGTGGCCGAGGCGGCGGCGGAGGCGGTGGATACGGCAGTGGAGGCGGCGGAGGATACGGTGGAGGTGGCGGTTACAGCCGTGGTGGAGGCGGAGGCGGTTATGGTAGTGGTGGCCGCCGTGAAGGTGGTTACAACCGCAACGGTGGTGGTGGAGGCTACGGAGGCGGCGGCGGCGGCTATGGTGGTGGTGGTTATGGCGGTGGCCGTGACCGTGGCTACGGTGGTGGTGGTGGTGATGGTGGATCTCGCTACTCCAGAGGTGGTGGTGCCTCTGATGGAAGCTGGAGAAGTTAA 552 0.5942 MASADVEYRCFVGGLAWATDSDALEKAFSPFGEIVESKVINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGQDLDGRNITVNEAQSRGRGGGGGGGYGSGGGGGYGGGGGYSRGGGGGGYGSGGRREGGYNRNGGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYSRGGGASDGSWRS 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0173 183 MobiDBLite consensus disorder prediction 127 183 - -
Mibi03g0173 183 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Mibi03g0173 183 PANTHER GEO13361P1-RELATED 3 178 - -
Mibi03g0173 183 SUPERFAMILY RNA-binding domain, RBD 8 118 IPR035979 GO:0003676
Mibi03g0173 183 Gene3D - 2 122 IPR012677 -
Mibi03g0173 183 SMART rrm1_1 9 82 IPR000504 GO:0003723
Mibi03g0173 183 FunFam Glycine-rich RNA-binding protein GRP1A 2 114 - -
Mibi03g0173 183 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0173 Mibi-ChrMibi03 1821532 1822391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0173 10 88 Eukaryotic Initiation Factors Gene Family AT2G23350 34.177 4.86e-06 44.3