Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0169 ATGTTGCGTTGCCTCAACACTTCCGGCAATGTCACAGGAAACTGCTCCGACATGACTGTGTTAGAAAGACAGAGGATGAGGATGAAATGGCAACAAGATCATCAATTTCATCAAAACCAGAGCTTTTATGGTGATTCTGCTCTCGGTGAGGTTGTGGCTAAGTCCATCAAACCCGAATCGGGTCAACCCCATTTTCCTATTTTCGGGTTCGGGTCGAATGGTTTTGAAGTGAGCCCTGAAATTTCAACAACTTCCATGGTAGTAGCAGCTGAAGAACCCAGAAACAGAGATGACTCTGTTTCAGAGAAAGAGAAGATTGGCTCTGCATGTGGGAAACAGAGCTTGAAGAAGAGGAAATCTGATAAGGTTCATAGCTCAAAGGAAGTTGCAGAAAGTGAAAACAAAGAGATGAAGAAGATGAAAGGAAGTGGTGGAGAAGAAGGTGAATCCAAAATAACAGAGCAAAATAACAACAAAGAAAACTCTAAAGGAAATTCTAAGGTGTCGGATGTTCAAAAGACTGATTATATTCATGTCCGAGCACGTCGTGGCCAAGCAACTGATAGCCATAGCCTAGCAGAAAGAGTTAGAAGGGAAAAAATAAGTGAGAGAATGAAGTATTTGCAGGATTTAGTACCAGGTTGTAACAAAATCACAGGAAAAGCTGGAATGCTTGATGAGATCATCAACTATGTTCAGTCTCTTCAACGCCAAGTAGAGTTCTTGTCAATGAAATTAGCTGCTGTAAACCCAGCACTTGACTTTAACCTGGATGATCTCTTCTCCAAAGAGGTTTTTAGTACTTGTGGTCCAAGTTTTGCAACATTTGGGAATATGGGATCAAACATGAACAACAATCCAGCTTATCTTCAGTTCAATAACTCAGAGCAACAGTTTTCTCCCTCAATCCCAGAAACGTTGCTTGATTCCTGCTGTTTCCCTCAAATTCTGCCATCCTCTACTTATGACTCTGATCTTCATAATCTAATCAATGTGGGTTTTGATCAACCACGAGCATCAGCAGCAGCAGCAGCATCATTTCTTTCTCAGCCATTCACAGGTTTAGTTGAAGCTAGCAATCCAAAGATGGAGATATAG 1098 0.4135 MLRCLNTSGNVTGNCSDMTVLERQRMRMKWQQDHQFHQNQSFYGDSALGEVVAKSIKPESGQPHFPIFGFGSNGFEVSPEISTTSMVVAAEEPRNRDDSVSEKEKIGSACGKQSLKKRKSDKVHSSKEVAESENKEMKKMKGSGGEEGESKITEQNNNKENSKGNSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPALDFNLDDLFSKEVFSTCGPSFATFGNMGSNMNNNPAYLQFNNSEQQFSPSIPETLLDSCCFPQILPSSTYDSDLHNLINVGFDQPRASAAAAASFLSQPFTGLVEASNPKMEI 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0169 365 FunFam Basic helix-loop-helix transcription factor 182 254 - -
Mibi03g0169 365 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 96 293 IPR024097 GO:0006355
Mibi03g0169 365 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 185 235 IPR011598 GO:0046983
Mibi03g0169 365 SMART finulus 191 241 IPR011598 GO:0046983
Mibi03g0169 365 MobiDBLite consensus disorder prediction 157 172 - -
Mibi03g0169 365 Pfam Helix-loop-helix DNA-binding domain 189 236 IPR011598 GO:0046983
Mibi03g0169 365 MobiDBLite consensus disorder prediction 91 156 - -
Mibi03g0169 365 MobiDBLite consensus disorder prediction 88 172 - -
Mibi03g0169 365 CDD bHLH_AtBPE_like 175 260 - -
Mibi03g0169 365 Gene3D - 182 255 IPR036638 GO:0046983
Mibi03g0169 365 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 183 253 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0169 Mibi-ChrMibi03 1777604 1779724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0169 9 333 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 43.213 7.03e-64 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi03g0169 HLH 2e-06 No_clan