LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi03g0154	ATGGCTTCCTCTAGTGGAAATTCCTTTGGATCGTCAAAAAACTCTGGTTCAGATGAGGATTTGCAGGTCTTGATGATGGATCAGAGGAAGAGGAAGAGGATGATTTCGAATCGCGAATCGGCGAGGAGATCGAGAATGAGGAAACAGAAGCATCTTGATGATCTTGTGGCTCAAGTGGCTCATCTCAGAACTGAGAATCAGAAGATTCTCACACGTGTGAATCTCACAACCCAGCAATTTCTCACAATTGAGACTGAGAATTCTGTTCTCAGAGCCCAAGCCAACGAGCTCACGCACAGATTGCAATCTCTCAACGAAATTGCGGATTTCGTGACCACAAATTCTGCAATTTCGTCATCATCAAGCTTCATGGAATCCAGCAACAACAACAGCTTCTTGTTCTTCAACAACAATAACAACCCATTGAACATGGCCTACCACATGAACCAACCAATCATGGCTTCTCCTGACATGTTTCATGATCAGTACTGTTGA	495	0.4384	MASSSGNSFGSSKNSGSDEDLQVLMMDQRKRKRMISNRESARRSRMRKQKHLDDLVAQVAHLRTENQKILTRVNLTTQQFLTIETENSVLRAQANELTHRLQSLNEIADFVTTNSAISSSSSFMESSNNNSFLFFNNNNNPLNMAYHMNQPIMASPDMFHDQYC	164

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi03g0154	164	SUPERFAMILY	Leucine zipper domain	29	81	IPR046347	GO:0003700\|GO:0006355
	Mibi03g0154	164	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	32	47	IPR004827	GO:0003700\|GO:0006355
	Mibi03g0154	164	MobiDBLite	consensus disorder prediction	1	50	-	-
	Mibi03g0154	164	FunFam	BZIP transcription factor	27	78	-	-
	Mibi03g0154	164	Coils	Coil	87	107	-	-
	Mibi03g0154	164	Gene3D	-	27	82	-	-
	Mibi03g0154	164	PANTHER	BZIP TRANSCRIPTION FACTOR 44	5	156	-	-
	Mibi03g0154	164	MobiDBLite	consensus disorder prediction	23	50	-	-
	Mibi03g0154	164	MobiDBLite	consensus disorder prediction	1	21	-	-
	Mibi03g0154	164	CDD	bZIP_plant_GBF1	30	80	IPR045314	GO:0003700\|GO:0006355
	Mibi03g0154	164	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	27	90	IPR004827	GO:0003700\|GO:0006355
	Mibi03g0154	164	Pfam	bZIP transcription factor	29	75	IPR004827	GO:0003700\|GO:0006355
	Mibi03g0154	164	SMART	brlzneu	25	89	IPR004827	GO:0003700\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi03g0154	Mibi-ChrMibi03	1597686	1598180	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi03g0154	25	157	bZIP Transcription Factor Family	AT4G34590	55.882	3.34e-45	144

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Mibi03g0154		bZIP_1	2.7e-10	CL0018