Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0142 ATGTTTGTTTTATCTGGGGACCAGAGTTTCATAGATGATGCTTTAGGAAGATGGGTATGTGTAGAGAGAAAGAGTAAGTCTGAACTTTCTGCGGAATTTGGCGTCTGTGTTGGTACTGGTGTGACCTTGAATAACCATTTTTGCTTCATTGTATTCCAAGAACATTCAGTGCATGTTTGCATTAGCTTACTGCTTTTACTTCCTATAAAGCAACAAGCAGAGGGTTTTGATAATATGGCAACTTATTTGCCAAATTCATATTCTGAGACACCAATTACCTCTAGTAATATAACGTTGTTTATGAACACTGGTTCATACCCAGAATCATTCTCTGGCAATTCTCAGGAGCAAAATGACTTTGGGATCCCACCAATGAGTTTGTCACAATCAGCCCGTGAACAGCAAGAAATCTTAGCAAATCTTGGTGGATTACAAACTGGGGACTATGATTTCACTGCATGGAGACAAGGGAGAAATGAGATGCTAGTACCACATCAAATGGATGGACATAACTTGCAGAGCCAGGGGTTATCTCTCAGCCTTGGAACCCAAACACCATCAGGAATCCAAGTGTCTCCTTTCCATGATCAAAATTCCACTCCGAGTTTTGATTCGTTTTTAGGTCAGAATCCATCAATTTCGGGCCATAAAAACAGCTCATCTAGGCATGAGTGTATGAGGCATGGTGAAATTTTGCCTCCTGATTTACCTGAAGCTAGTCAAGTGCTGAATAGAGGGGATTATTCGTTGCATGGGATGCCAAATGTTTCTAGAACAATTCCTAATTCCAAGTACCTCAAGGCAGCACAAGAGCTACTTGATGAAGTTGTTGACATCCAAAAAGCAATAAAACAATCCAATGTGAGAAGTCCTAGCACACGTGAGAAAAAGACTTCTAAGGAGAATGATGGAATACTCGAAAATGAAAGGGCACCTGCTGATGGGGAGCCTAACCCTCAAGATTTAGCTGGCAATGCCTCTTGTGAGATTTCGCATGCCGAAAAACAAGATCTGCAGAATAAGTTAACAAAGCTACTGTCGATGCTGGATGAGGTTCATAGTAGGTACAAACAATATTTTCATCAGATGCAGATTGTGGTATCATCATTTGATGTGATAGCAGGACGTGGGGCAGCTAAACCATACACGGCACTGGCTCTCCAAACCATTTCACGCCATTTCCGGTGCTTGCATGATGCAATCACTGGCCAGATTAGTGCAACACAGAAGAGCCTTGGGGAGCAAGATTCTGCAGGAAATAATAATAAAGGAGTTGGAATATCAAGACTCCGATATGTTGACCAACAAATCCGGCAACAAAGGGCTCTCCAGCAGCTTGGAGTGATGCATAATGCATGGAGGCCACAAAGAGGACTACCAGAAGGCTCTGTTTCAATTCTTCGCGCTTGGCTTTTTGAACATTTCCTTCATCCCTATCCCAAAGATTCTGAAAAGGCAATGCTAGCAAGGCAGACAGGCTTGTCTAGAAGTCAGGTCTCGAATTGGTTTATAAATGCACGAGTTCGTCTTTGGAAACCTATGATTGAGGAAATGTACAAGGAAGAAATTGACAGTGTGGACTTGCACTCCAGTTCTTCAACTGATGATGGCGCATCCAAGGTAAGCAAAAGCGATGTTAAGATCTCTGATGATGGTTGTGATGATTTTCAACAGAGCCAGAGTTCAATAGTAGACAAGAACAACAACAATGTTGGACAAACTAAGGACTTGAGATCTGATAATAAGCAAACTGATGAGCAACAAAGGCTCAGCTTTGATGATTGTAGCGTCTTCCCAGATGACACAGTTGTTCACACCAATGAAGGCGGACCTGGGTTTGTGGCGGTTCCCCCAGCATGCCAAATGTCCGAGTTGGGGCGGTTTCAGGCTGGGACCGGCGTGTCACTGACATTAGGCTTGCAGCATTGTGAAGTTGGTGATTTTATGTCTGGCGAGAGCCGTCATCATAGCTTTGTTGTGATGAGGGAAGATGGTATTTATAATGCTGCCGCCATTGGAGCTCAGACATCGGAACTTGATTATGTAGCTGCCGGAAACCAGCACCAAAGGTTCAATTCTCCCCATTAA 2088 0.4325 MFVLSGDQSFIDDALGRWVCVERKSKSELSAEFGVCVGTGVTLNNHFCFIVFQEHSVHVCISLLLLLPIKQQAEGFDNMATYLPNSYSETPITSSNITLFMNTGSYPESFSGNSQEQNDFGIPPMSLSQSAREQQEILANLGGLQTGDYDFTAWRQGRNEMLVPHQMDGHNLQSQGLSLSLGTQTPSGIQVSPFHDQNSTPSFDSFLGQNPSISGHKNSSSRHECMRHGEILPPDLPEASQVLNRGDYSLHGMPNVSRTIPNSKYLKAAQELLDEVVDIQKAIKQSNVRSPSTREKKTSKENDGILENERAPADGEPNPQDLAGNASCEISHAEKQDLQNKLTKLLSMLDEVHSRYKQYFHQMQIVVSSFDVIAGRGAAKPYTALALQTISRHFRCLHDAITGQISATQKSLGEQDSAGNNNKGVGISRLRYVDQQIRQQRALQQLGVMHNAWRPQRGLPEGSVSILRAWLFEHFLHPYPKDSEKAMLARQTGLSRSQVSNWFINARVRLWKPMIEEMYKEEIDSVDLHSSSSTDDGASKVSKSDVKISDDGCDDFQQSQSSIVDKNNNNVGQTKDLRSDNKQTDEQQRLSFDDCSVFPDDTVVHTNEGGPGFVAVPPACQMSELGRFQAGTGVSLTLGLQHCEVGDFMSGESRHHSFVVMREDGIYNAAAIGAQTSELDYVAAGNQHQRFNSPH 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0142 695 MobiDBLite consensus disorder prediction 286 322 - -
Mibi03g0142 695 SMART prehox3 254 403 IPR006563 -
Mibi03g0142 695 SMART HOX_1 453 517 IPR001356 GO:0003677
Mibi03g0142 695 Pfam Associated with HOX 260 402 IPR006563 -
Mibi03g0142 695 SUPERFAMILY Homeodomain-like 454 520 IPR009057 -
Mibi03g0142 695 CDD homeodomain 453 514 IPR001356 GO:0003677
Mibi03g0142 695 MobiDBLite consensus disorder prediction 290 310 - -
Mibi03g0142 695 MobiDBLite consensus disorder prediction 553 577 - -
Mibi03g0142 695 Gene3D - 450 526 - -
Mibi03g0142 695 ProSiteProfiles 'Homeobox' domain profile. 450 513 IPR001356 GO:0003677
Mibi03g0142 695 Coils Coil 335 355 - -
Mibi03g0142 695 Pfam Homeobox KN domain 470 509 IPR008422 GO:0003677|GO:0006355
Mibi03g0142 695 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 180 535 - -
Mibi03g0142 695 MobiDBLite consensus disorder prediction 525 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0142 Mibi-ChrMibi03 1477787 1482295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0142 130 693 Homeobox Transcription Factor Family AT4G34610 44.637 4.58e-123 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mibi03g0142 POX 7.3e-48 No_clan