Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0135 ATGGAAGAAGGAGAAGTAGAGAGAAGTAAGTGCCAAGACTGTGGGAACCAGGCTAAGAAAGGTTGTGAGTACAAGAGGTGTAGAACTTGTTGCAACAACAAAGGATTTGAGTGTGAAACACATGTTCACAGCACTTGGGTTCCTCCACCTCATAGAAGACGCCATAGAGGTCACCATCCTCATCCTCATCCTCATAATTTCCCTTATAAAAAGCACAAGCACAACAACCACTATCCCCCAGATGAAGAGAAAGAGGTGAAGTTTCCGGAATGGGTGAGTATGAAGGCGAAGTTTAGGTGCGTGCAAGTGAGATCAAATGATGATTGGGTGAATGAATTTGCGTACCATACGTCAGTGATGATAGGAGGGCATGTGTTTAGTGGCCTTCTTCATGATCAAGGCCCTTCTCATCATCACACTTCTTCAGTTCCCCATCTTCGTGATGCTGAAAATTTAATGGCTCCTCCATTATTATCATCATCTTCTACTGCTCCAGATGACTCTTTCTTTCATCCAACATACCCTTTTCCCTTACCTTCTATGCCTTATTTCTCCAACCCCCAACCTTAG 570 0.4386 MEEGEVERSKCQDCGNQAKKGCEYKRCRTCCNNKGFECETHVHSTWVPPPHRRRHRGHHPHPHPHNFPYKKHKHNNHYPPDEEKEVKFPEWVSMKAKFRCVQVRSNDDWVNEFAYHTSVMIGGHVFSGLLHDQGPSHHHTSSVPHLRDAENLMAPPLLSSSSTAPDDSFFHPTYPFPLPSMPYFSNPQP 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0135 189 Pfam Domain of unknown function (DUF702) 9 136 - -
Mibi03g0135 189 MobiDBLite consensus disorder prediction 49 71 - -
Mibi03g0135 189 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 5 150 IPR007818 GO:0003700|GO:0006355
Mibi03g0135 189 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 87 135 IPR006511 -
Mibi03g0135 189 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 10 49 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0135 Mibi-ChrMibi03 1386479 1387561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0135 10 134 C2H2 Transcription Factor Family AT2G21400 47.727 2.18e-37 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mibi03g0135 DUF702 5.2e-40 No_clan