Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0131 ATGAAGATACTTTGTGATGTGTGCAACAGAGTAGAAGCCTCTCTCTTCTGTCCCTCCGACGAAGCAGCTCTCTGCTATGCCTGTGATCTTACCATCCACCATGCCAATAAGCTCTCTCGCAAACATTCTCGCTTCTCTCTTCACCACCCTCCCTCCAGTTCCTCTCCCCTCTGTGATATCTGTCAAGAGAGGAAAGCGTATTTGTTTTGCCAAGAAGACAGAGCAATACTTTGCAGAGAATGTGATGTTTCTATTCACAAAGCAAGCGAGCATACACGGAAACATAATAGGTTTCTTCTCACTGGTGTGAAGATCTCTGCTTCTATGTCAAACAATAGTAATAATGATTCTCATCAATCTAACCTGAAGAGACAGAGATCATTAGTTTCAAGTGAGAATGATGCGAATTCTTCAATGGAGAATAATAAAAGTCGTTTATTAGCCTCATCATCAGCGACTGGTTTTGGTGGTAAAATCGTTGAAGATCAGTGTATAATTAGTGATACCAGTTCACCAGTTTCAACAAGCAGCATTTCTGAATACTTGATCGAGAAGATACCTGGTTATTGCTTTGAAGAACTTCTTGATGCTTCTTCTTTCACTACACCTAATGGCTTCTCTAAGAAGTATGAGAACCTGTCAGCATTGGAGGAGCAAGATATTGAAGCATATGTATTTGTTTAG 684 0.405 MKILCDVCNRVEASLFCPSDEAALCYACDLTIHHANKLSRKHSRFSLHHPPSSSSPLCDICQERKAYLFCQEDRAILCRECDVSIHKASEHTRKHNRFLLTGVKISASMSNNSNNDSHQSNLKRQRSLVSSENDANSSMENNKSRLLASSSATGFGGKIVEDQCIISDTSSPVSTSSISEYLIEKIPGYCFEELLDASSFTTPNGFSKKYENLSALEEQDIEAYVFV 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0131 227 SUPERFAMILY B-box zinc-binding domain 50 92 - -
Mibi03g0131 227 Pfam B-box zinc finger 4 43 IPR000315 GO:0008270
Mibi03g0131 227 Pfam B-box zinc finger 55 93 IPR000315 GO:0008270
Mibi03g0131 227 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Mibi03g0131 227 MobiDBLite consensus disorder prediction 110 143 - -
Mibi03g0131 227 CDD Bbox1_BBX-like 4 45 - -
Mibi03g0131 227 FunFam B-box zinc finger protein 21 1 98 - -
Mibi03g0131 227 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 208 - -
Mibi03g0131 227 SMART bboxneu5 53 100 IPR000315 GO:0008270
Mibi03g0131 227 SMART bboxneu5 4 47 IPR000315 GO:0008270
Mibi03g0131 227 CDD Bbox1_BBX-like 58 100 - -
Mibi03g0131 227 Gene3D Classic Zinc Finger 1 99 - -
Mibi03g0131 227 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0131 Mibi-ChrMibi03 1349657 1351183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0131 1 220 C2C2-CO-like Transcription Factor Family AT1G75540 47.186 4.38e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Mibi03g0131 zf-B_box 4.2e-09 No_clan