Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0127 ATGGATTTGAAGGATTAAATGGAGGTTGTGGTAGCAGCAAACGCCTTCAAATCGAGTTTGCACAGAGAATTGACATGTATGAAATCAACACAGCAAGCGTTTGGAGAGGAAATTTGGTGTTTGAATTCGAATAACGGTGTTGTTGCTTGTGAGGATTTCTCTGTGGATGACCTATTCGATTTCTCTCAGACTGAAATTCAACCTGAATATGAACAAGAAGAAGAAGAAGAAGAAGACGACGAAGAAAAAGACAGTCTCTCTGGTTCCTCCTCACAAAGCGAAGAAGAAACAAACTCAAATTCCTCTTCTGGTCTCGCAGATTCCGGCTTCACTTTTTCCAACGAACTCGCCGTTCCTGACGACGATTTGGCTGACTTAGAATGGGTTTCTCATTTCGTTGACGATTCTGTGCCGGAGCTTTCTCTTCTTTACCCTGTACGTTCAGAGGAAACGAAAACCCGGTCTGAACCGGAGCCTAAGCCGGGTTTTGCGAAAACTCCTTGTTTTCCCTTTGAATTTCCCGTCAAGGCGAGAAGCACAAAGCGTAGAAGAGCCAGGAATTTCAGCCCTATGATTTCACGGCAGTCGTCGCCGTCGTCATCTTCGTGTTCATCGGTTCTTTCGTCGTCGTTGACTCTTATCACCGCCGTCGGAGTTCCGGCAGCCGGTTTTGTTACAGAACCGCCGGTGAAGAAGCAGAAGAAAAAACCGGAGGCTAATATCGCAGCCGGTGATGGTGGGCCCCAGATTCAGCGTCGGTGCACTCATTGTCAAGTGCAGAAGACACCTCAATGGAGAACCGGTCCGCTTGGGCCGAAAACCCTGTGTAACGCTTGTGGGGTCCGGTTCAAGTCCGGTCGGCTTTTTCCGGAGTATAGACCGGCTTGTAGCCCAACCTTCTCTAGTGATGTCCACTCGAATAGCCATCGTAAGGTGTTGGAGATGAGGAAGAGGAAGGAAATGAGTGAACCGGAATGTGGGTTATTGGTTGACTCAGACTCAAACTCAAACTCGAACTGTTCTGAGTTGCTGAATGTCTAG 1041 0.4793 MDLKDXMEVVVAANAFKSSLHRELTCMKSTQQAFGEEIWCLNSNNGVVACEDFSVDDLFDFSQTEIQPEYEQEEEEEEDDEEKDSLSGSSSQSEEETNSNSSSGLADSGFTFSNELAVPDDDLADLEWVSHFVDDSVPELSLLYPVRSEETKTRSEPEPKPGFAKTPCFPFEFPVKARSTKRRRARNFSPMISRQSSPSSSSCSSVLSSSLTLITAVGVPAAGFVTEPPVKKQKKKPEANIAAGDGGPQIQRRCTHCQVQKTPQWRTGPLGPKTLCNACGVRFKSGRLFPEYRPACSPTFSSDVHSNSHRKVLEMRKRKEMSEPECGLLVDSDSNSNSNCSELLNV 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0127 346 PIRSF Txn_fac_GATA_plant 25 341 IPR016679 GO:0003677|GO:0005634|GO:0045893
Mibi03g0127 346 Pfam GATA zinc finger 254 287 IPR000679 GO:0006355|GO:0043565
Mibi03g0127 346 ProSitePatterns GATA-type zinc finger domain. 254 279 IPR000679 GO:0006355|GO:0043565
Mibi03g0127 346 FunFam GATA transcription factor 246 327 - -
Mibi03g0127 346 SMART GATA_3 248 302 IPR000679 GO:0006355|GO:0043565
Mibi03g0127 346 ProSiteProfiles GATA-type zinc finger domain profile. 248 284 IPR000679 GO:0006355|GO:0043565
Mibi03g0127 346 PANTHER GATA TRANSCRIPTION FACTOR 37 321 - -
Mibi03g0127 346 MobiDBLite consensus disorder prediction 90 110 - -
Mibi03g0127 346 MobiDBLite consensus disorder prediction 64 111 - -
Mibi03g0127 346 MobiDBLite consensus disorder prediction 67 84 - -
Mibi03g0127 346 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 250 311 - -
Mibi03g0127 346 CDD ZnF_GATA 253 301 IPR000679 GO:0006355|GO:0043565
Mibi03g0127 346 Gene3D - 248 322 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0127 Mibi-ChrMibi03 1289150 1290841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0127 15 328 C2C2-Gata Transcription Factor Family AT5G66320 40.950 3.55e-56 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mibi03g0127 GATA 6.5e-16 CL0167