Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0102 ATGGCTGCGGTTTCAAATTTCCCAACCTTATCATCCTCCCTTTCTAAACCTTCTTCCTCCCTTGTCACCCCAACCACCGCCAACACAAAAAATACTTGTTTTTCCTCCGACAAAACCCTCCTAAAACCCCCTCTTTCTCTCGCCGCCACAGAAACCCACAACACGTCTTTCACAGTTTCATCTAAAAACCCAATTTCCGATCTCATTCGCGAGAATGAGCCGTACCCAGAACCCGAATCAGAATCAGAATCAGAATCCTTTCACTTCAACGATGATGATGACGAAAAGCCCCGCGAAGAGTGTGGTGTGGTGGGTATATACGGTGATCCTGAGGCTTCTCGTCTCTGTTATTTGGCCCTTCACGCACTCCAACATCGTGGTCAAGAAGGTGCAGGAATCGTCGCTGTTAACAACAACAACGTTCTTCAATCGATTACCGGGTTAGGCCTTGTTTCTGATGTTTTTAATGAATCTAAGCTCGACCAATTACCTGGAAGTTTGGCCATTGGGCATGTTCGCTATTCAACCGCAGGCCAGTCTATGCTCAAGAATGTTCAGCCTTTTGTTGCTGGGTATCGATTTGGTTCTGTGGGTATAGCTCATAACGGTAATTTGGTGAATTATCGAAGCTTAAGGGCCAAACTTGAGAACGAGGGGTCGATTTTTAACACTAGTTCTGATACTGAGGTTGTGCTTCATCTCATTGCAACCTCAAAGCAGAGGCCTTTCATGTTGAGAATTGTTGATGCATGCGAGCAGATTCAAGGGGCTTATTCCTTTGTTTTTGTCACTGAGGATAAGATTGTTGCAGTGAGGGATCCCCATGGATTCCGTCCTCTGGTTATGGGGAGGAGAAGCAATGGAGCTATAGTGTTTGCCTCTGAAACCTGTGCTCTTGATTTGATTGAAGCAACTTTTGAAAGAGAGGTGAACCCTGGTGAAGTTGTAGTGGTGGACAATAGTGGGATTCAATCTTTCTGCTTAATGACTCATCGACAGCCAAAACAATGCATTTTTGAGCATATATACTTTGCCCTTCCAAACTCTGTTATTTTTGGAAGATCAGTGTATGAATCTAGAAGAACATTTGGCAAGATTTTGGCAACTGAAAACCCAGTTGATTGTGATGTGGTGATAGCGGTTCCTGATTCCGGTGTTGTGGCTGCACTTGGGTATGCTGAACAAGCAGGTGTTCCTTTCCAACAAGGACTAATAAGGTCTCACTATGTAGGAAGGACTTTCATTGAGCCATCCCAGAAGATCAGAGACTTTGGAGTGAAGCTGAAGCTTGCGCCTGTTCGGGCCGTGATAGAAGGCAAGAGAGTTGTGGTGGTGGATGATTCAATTGTGAGAGGAACAACATCTTCCAAAATAGTGAGGTTGATAAAAGAAGCGGGTGCTAAAGAAGTTCACATGAGGATTGCTTGTCCACCTATCATAGCATCATGTTATTATGGAGTGGACACACCAAGTTCTGAGGAGTTGATCTCTAACAGGATGAGTACAGAGGAAATTAGAAACTTCATTGGATCAGATACACTCGCATTTCTTCCTCTTGATAGCTTGAAGAAGCTGTTAGGACATGATTCTCCTAATTATTGCTTTGCTTGCTTCTCTGGGAACTACCCTGTTGAACCCAAAGAGCTGATGGTGAAGAGAGTTGGTGACTTTATGGATGATGGCTTAAATGGGAGCTTGGAATCTATTGATGGAGGATGGGTTCATGCAAATCCAAGCCCTAAAGAGGAAAAGGTCGTTGGTCACTGA 1767 0.4431 MAAVSNFPTLSSSLSKPSSSLVTPTTANTKNTCFSSDKTLLKPPLSLAATETHNTSFTVSSKNPISDLIRENEPYPEPESESESESFHFNDDDDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVAVNNNNVLQSITGLGLVSDVFNESKLDQLPGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGIAHNGNLVNYRSLRAKLENEGSIFNTSSDTEVVLHLIATSKQRPFMLRIVDACEQIQGAYSFVFVTEDKIVAVRDPHGFRPLVMGRRSNGAIVFASETCALDLIEATFEREVNPGEVVVVDNSGIQSFCLMTHRQPKQCIFEHIYFALPNSVIFGRSVYESRRTFGKILATENPVDCDVVIAVPDSGVVAALGYAEQAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLAPVRAVIEGKRVVVVDDSIVRGTTSSKIVRLIKEAGAKEVHMRIACPPIIASCYYGVDTPSSEELISNRMSTEEIRNFIGSDTLAFLPLDSLKKLLGHDSPNYCFACFSGNYPVEPKELMVKRVGDFMDDGLNGSLESIDGGWVHANPSPKEEKVVGH 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0102 588 Hamap Amidophosphoribosyltransferase [purF]. 100 542 IPR005854 GO:0004044|GO:0009113
Mibi03g0102 588 Gene3D - 361 525 IPR029057 -
Mibi03g0102 588 MobiDBLite consensus disorder prediction 51 67 - -
Mibi03g0102 588 MobiDBLite consensus disorder prediction 51 99 - -
Mibi03g0102 588 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 101 321 IPR017932 -
Mibi03g0102 588 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 99 549 - -
Mibi03g0102 588 CDD PRTases_typeI 364 475 IPR000836 -
Mibi03g0102 588 CDD GPATase_N 101 352 IPR035584 -
Mibi03g0102 588 SUPERFAMILY PRTase-like 337 548 IPR029057 -
Mibi03g0102 588 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 101 338 IPR029055 -
Mibi03g0102 588 Pfam Phosphoribosyl transferase domain 375 472 IPR000836 -
Mibi03g0102 588 MobiDBLite consensus disorder prediction 1 38 - -
Mibi03g0102 588 TIGRFAM purF: amidophosphoribosyltransferase 101 543 IPR005854 GO:0004044|GO:0009113
Mibi03g0102 588 Pfam Glutamine amidotransferase domain 180 299 IPR017932 -
Mibi03g0102 588 MobiDBLite consensus disorder prediction 72 99 - -
Mibi03g0102 588 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 101 543 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0102 Mibi-ChrMibi03 1082569 1084335 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0102 79 574 PRT Gene Family AT2G16570 80.483 0.0 839