Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0081 ATGGAAAGTACAACTGCTAGAAAAACTCAAAAGGCTGACAGAGAAAAACTAAGGAGGGACCGGCTCAATGAACAGTTTGTAGAACTGGGCAGCATTTTAGATCCTGATAGGCCCAAAAATGACAAAGCAACCATTCTTGCTGATACAATCCAATTGCTTAAGGACCTTACTTCGCAAGTTAGTAACCTCAAAGAGGAATATGCTATCCTGACTGAAGAATCCCAAGAGTTGACTCAGGAGAAAAATGATCTTAGGGAAGAGAAGGCTTCTCTTAAATCAGATATTGAGAGCTTGAATAACCAATACCAGCAACGTCTCAGGACTATGTTCCCCTGGACTGCAATGGATCACTCGGTGATGATGGCTCCACCTTCATATCCATATCCAGTGCCAGTGCCAGTGCCAGTGCCAGTCCCTCCTGGTCCAATTCCCATGCATCCACCCATGCAGTCATACCCCTTCTTCGCAAATCAAAACCCCGGGGTCATGCCAAATCCGTGTTCAACATTTGTCCCTTATTTAGCCCCTAATACTCTTGTTGAACATCAGTCCCCACAATATGTAACCCCTCCACTTCCTCCAGGTAACCATTCCCATGCATCAGGAACACAACATTCCAGAAACAAAACAGCCAGGGAGAGTAAGGTTGAAAATAATGAATGTGCTAATGATGTCACCACAGACCTGGAGTTGAAAACTCCTGGATCTGCGACAGATCAGGAGTTGTCATCTGGGCAAAGAAAACCCAGCAAGCTGTCTGTGAAGGAAAGCAGTTACGCAGAAGGGAGTTCATCTGGTAGGTGCTCTTCCGCAAATAGCGTACAGGATAGCTCATCAAGTAGCGTAGTTGGAAGCAGAAAAGCTGATGGATGA 873 0.4548 MESTTARKTQKADREKLRRDRLNEQFVELGSILDPDRPKNDKATILADTIQLLKDLTSQVSNLKEEYAILTEESQELTQEKNDLREEKASLKSDIESLNNQYQQRLRTMFPWTAMDHSVMMAPPSYPYPVPVPVPVPVPPGPIPMHPPMQSYPFFANQNPGVMPNPCSTFVPYLAPNTLVEHQSPQYVTPPLPPGNHSHASGTQHSRNKTARESKVENNECANDVTTDLELKTPGSATDQELSSGQRKPSKLSVKESSYAEGSSSGRCSSANSVQDSSSSSVVGSRKADG 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0081 290 Pfam Helix-loop-helix DNA-binding domain 7 56 IPR011598 GO:0046983
Mibi03g0081 290 Gene3D - 2 67 IPR036638 GO:0046983
Mibi03g0081 290 Coils Coil 46 108 - -
Mibi03g0081 290 PANTHER TRANSCRIPTION FACTOR BHLH121 2 288 IPR044579 GO:0003700|GO:0055072
Mibi03g0081 290 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 4 77 IPR036638 GO:0046983
Mibi03g0081 290 SMART finulus 12 62 IPR011598 GO:0046983
Mibi03g0081 290 MobiDBLite consensus disorder prediction 220 290 - -
Mibi03g0081 290 CDD bHLH_AtILR3_like 11 85 - -
Mibi03g0081 290 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 6 56 IPR011598 GO:0046983
Mibi03g0081 290 MobiDBLite consensus disorder prediction 184 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0081 Mibi-ChrMibi03 933985 935479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0081 4 241 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 62.762 1.88e-94 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi03g0081 HLH 1.8e-09 No_clan