Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0079 ATGGCGAACCCTAAGGTCTACTTCGACATGACAATCGGCGACGAGCCGGCCGGCCGCATAGTCATGGAGCTCTTCGCCGACACAACGCCGAAGACCGCCGAGAACTTCCGTGCCCTATGCACCGGCGAGAAGGGAAACGGCCGGAGCGGCAAGCCACTCCACTACAAGGGCTCCATCTTCCACCGTGTGATCCCGGAGTTCATGTGCCAGGGCGGCGACTTCACCGCCGGCAACGGCACCGGCGGCGAGTCGATCTACGGCGAGAAGTTCGAGGACGAGAACTTCGTGAAGAAGCACACAGGTCCAGGGATTCTGTCTATGGCGAATGCGGGACCAGGAACCAACGGATCGCAATTCTTCATATGTACGGAACAGACGGCGTGGCTGGACGGAGCGCATGTGGTGTTTGGTCAGGTGGTGGAGGGCATGGAGGTGGTTAGGGAGATCGAGAAGGTTGGGTCTCGGAGTGGGAAGACATCGAAGCCGGTGGTGATTGCTGACTGTGGTCAAGTAATTGAGCTAGAGGAGAATATGGCTTCTGGTGACTCTTGA 552 0.5851 MANPKVYFDMTIGDEPAGRIVMELFADTTPKTAENFRALCTGEKGNGRSGKPLHYKGSIFHRVIPEFMCQGGDFTAGNGTGGESIYGEKFEDENFVKKHTGPGILSMANAGPGTNGSQFFICTEQTAWLDGAHVVFGQVVEGMEVVREIEKVGSRSGKTSKPVVIADCGQVIELEENMASGDS 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0079 183 FunFam Peptidyl-prolyl cis-trans isomerase 1 172 - -
Mibi03g0079 183 PIRSF Peptidylpro_ismrse 1 176 IPR024936 GO:0003755
Mibi03g0079 183 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 7 169 IPR002130 GO:0000413|GO:0003755
Mibi03g0079 183 SUPERFAMILY Cyclophilin-like 2 171 IPR029000 -
Mibi03g0079 183 CDD cyclophilin_ABH_like 4 169 - -
Mibi03g0079 183 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 7 170 IPR002130 GO:0000413|GO:0003755
Mibi03g0079 183 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 5 170 - -
Mibi03g0079 183 Gene3D - 1 178 IPR029000 -
Mibi03g0079 183 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 55 72 IPR020892 GO:0003755|GO:0006457
Mibi03g0079 183 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 103 118 IPR002130 GO:0000413|GO:0003755
Mibi03g0079 183 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 131 146 IPR002130 GO:0000413|GO:0003755
Mibi03g0079 183 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 130 IPR002130 GO:0000413|GO:0003755
Mibi03g0079 183 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 24 39 IPR002130 GO:0000413|GO:0003755
Mibi03g0079 183 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 60 72 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0079 Mibi-ChrMibi03 924812 925363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0079 3 152 U-box Gene Family AT5G67530 45.161 3.62e-29 110