Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0071 ATGGCATCTGCTGCTTCGTTTTATGAGGTGCTAGGGATTCCAATGGGGGCAAGCTGCCAAGAAATAAAGAGTGCATACAGGAAGCTTGCAAGAACATGTCACCCTGATGTGGTGGCTATGAATCACAAGGCGAAATCAGGCAGCGAGTTCATGAAGATCCACTCGGCCTATTTAACACTGTCAGATCCGGATAAGCGTGCTCAATATGACAGGCAACTTAATTACATTTACAGGTACCCAAGATCTTCTCAGAATTCATCTCTCCCTTGGCAAAATATGGACTCCATGTCAGGTTATCATTACAGATTTGGCCAAGCTGGTCATAATTGGGAGACAGATCAGTGCTGGTGA 351 0.453 MASAASFYEVLGIPMGASCQEIKSAYRKLARTCHPDVVAMNHKAKSGSEFMKIHSAYLTLSDPDKRAQYDRQLNYIYRYPRSSQNSSLPWQNMDSMSGYHYRFGQAGHNWETDQCW 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0071 116 CDD DnaJ 7 62 IPR001623 -
Mibi03g0071 116 ProSiteProfiles dnaJ domain profile. 6 73 IPR001623 -
Mibi03g0071 116 Gene3D DnaJ domain 1 92 IPR036869 -
Mibi03g0071 116 PRINTS DnaJ domain signature 8 26 IPR001623 -
Mibi03g0071 116 PRINTS DnaJ domain signature 26 41 IPR001623 -
Mibi03g0071 116 PRINTS DnaJ domain signature 45 65 IPR001623 -
Mibi03g0071 116 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 3 116 - -
Mibi03g0071 116 SUPERFAMILY Chaperone J-domain 3 104 IPR036869 -
Mibi03g0071 116 Pfam DnaJ domain 7 70 IPR001623 -
Mibi03g0071 116 SMART dnaj_3 5 65 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0071 Mibi-ChrMibi03 856941 857291 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0071 8 70 C2H2 Transcription Factor Family AT1G74250 45.455 8.46e-10 53.1