Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0058 ATGGGAAGGTCACCATGCTGTGAGAAAGCACACACTAACAAAGGAGCATGGACAAAGGAAGAAGATGATCGTCTTGTTGCTTACATAAGGGCTCACGGCGAGGGCTGCTGGCGCTCTCTACCCAAAGCCGCCGGCCTCCTCCGCTGCGGCAAGAGCTGCCGCCTCCGGTGGATAAACTACCTCCGTCCCGACCTCAAACGTGGCAACTTCACTGAGGAAGAAGATGAGCTCATCATCAAGCTCCACAGTCTCCTTGGCAATAAGTGGTCGTTGATAGCAGGGAGATTACCGGGAAGAACGGACAATGAGATAAAGAATTACTGGAATACACATATAAGAAGGAAGCTTCTGAGCAGAGGAATTGACCCCACCACTCACAGGCCTCTCAACGACCCTTCCCATATTGCTTCATCTGCTTCTCCTGCTCAACATCAACATTCACCCGACATTCCCATCAAAGATGAGAATCCCAAACCAGCCGAAGTGTGCCCTGACTTGAATCTTGAGCTAACCATCAGCCTCCCCCATCATCAGCCATCTCTCATCCACGATAAAAATAATGGAGGGAGCAGTACGGCCGGCGATGGCTATGATTTCTTGGGATTGAGAAGTGGCACTCTTTTGGATTGCAGGAGCAGCGTAACTCATATAGATTGGAGAGCGCTCAAAGAATGA 675 0.5037 MGRSPCCEKAHTNKGAWTKEEDDRLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRGIDPTTHRPLNDPSHIASSASPAQHQHSPDIPIKDENPKPAEVCPDLNLELTISLPHHQPSLIHDKNNGGSSTAGDGYDFLGLRSGTLLDCRSSVTHIDWRALKE 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0058 224 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi03g0058 224 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mibi03g0058 224 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi03g0058 224 SMART sant 66 114 IPR001005 -
Mibi03g0058 224 SMART sant 13 63 IPR001005 -
Mibi03g0058 224 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi03g0058 224 Gene3D - 68 138 - -
Mibi03g0058 224 FunFam MYB-related transcription factor 13 66 - -
Mibi03g0058 224 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 145 - -
Mibi03g0058 224 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi03g0058 224 MobiDBLite consensus disorder prediction 132 154 - -
Mibi03g0058 224 Gene3D - 14 66 - -
Mibi03g0058 224 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Mibi03g0058 224 CDD SANT 16 61 IPR001005 -
Mibi03g0058 224 FunFam Myb transcription factor 68 137 - -
Mibi03g0058 224 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi03g0058 224 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0058 Mibi-ChrMibi03 755797 756854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0058 1 212 MYB Transcription Factor Family AT4G38620 57.706 1.38e-95 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi03g0058 Myb_DNA-binding 3.9e-14 CL0123