Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0028 ATGGCTTCCCTCAGAAAATCCTTCAAGTCCTACTACTCTTATAAACACCCCAGAAACATCTCTGACGCCGACTCCGCCCACGAACAGCTTCCCATTCTCCTGGATCAAGAAACCTCCCACGATCATCCTCCTTTACCATCTATGACCTCAACCACCTCCCCCCATCGCCCCGAGGTTGTCCTAAAAATCGACGAAGCTGACCAACAACAGGGTGGCAAGATTTGGAGAGAAACCAGCTACGACTTCTGGAACAACAATGGAGGAGACGTCAACAACACTACTGCCAGTGATGGCGCCGCTAGTACCAGCGGTAATGACGGTGATAGCTTTGATTTCCGGCAAGGTGGGGAGGATCCACCCTCCATGCTCATTGGTAAGTTCTTGCACAAGCAGAAGGCTTCCGGTGACCTCTCCCTCGATATGGATTTAGAGATGGAGGAGTTCCAGCATGACTACAAGCTCCCTCCCGTCGAAGAGTCTCCCCAGCAGCATCCCAGTAGCATCTCCAAGGACCTCAAAGTCTCCTTCGAGGAACCCACTCCCAATGTTGTTGAGCCTGCCAGTGATACCGTCAGACGAAGGTACAGGGAGTCGCCGGCTCCCACCGAAGTCCATAAATCACCGAAAAGCGATCAACGTGGATCGCCGGCTGTTGGAGATGGCGAGGTGGTGAAGTGTACATCCAACGCCTCTGTTGAGAGGAATCTCTCGTTGCAGAGGAAATCCGGTTTGCTGAAGGCCGCCGCCAGGAACAGGTCCAGATTGATGGACCCACCGGAGGAGCCCGAACGAAGGTCCGGTCGGGTGGGAAAGTCAGGGCAAGTGTTTTCGGGGATGTTAGGGAGGAAAGGTGAGGACGACGAGGACGACCCATTTTCGGAGGAGGACTTGCCGGATGAGTTTAGGAAGACCCATTTTAGCATATGGGTTCTGCTTGAGTGGTTGAGTTTGATTTTGATCGTTGCTGCGCTGGCATGCACGCTGAGTATCCCAGTTTTGAGGAATAAGATTCTCTGGAAGCTTCGTTTATGGAAATGGGAGGTGATGATCCTGGTTCTTATTTGTGGGCGCTTGGTTTCTGACTGGGTCATTCGGATTTTGGTCTTCTTCATCGAAAGGAATTTCCTTTTGCGGAAGAGGGTCCTCTATTTTGTTTACGGTGTGAAGAAGGCGGTCCAAAATTGTCTCTGGTTGGGATTCGTTTTGATTGCCTGGCATATATTATTCGATAAGAAGGTTGAGAGGGAGACTAGAGGCAACGCCCTTCAATATGTCACCAAGGTCCTGGTCTGTTTCTTGGTGGGTACTTTGGTATGGCTGGCAAAAACTCTTGTGGTTAAGGTTATGGCTTCTTCATTCTATACAAGCACATACTTTGATAGGATTCAGGAGTCACTGTTTAATCAGTTTGTGATTGAAACGTTGTCGGGGCCTCCTCTGATCGAGATTCAGAAGTCGGAGGAAGAGGAACAAAAGCTTGCTGATGAGGTTCAGAAACTGCAGAATGCTGGGGTTAACATCCCTCCTGAGCTCAGGGCAACTGCCTTTTCCACGACCAAGAGTCCAAAGGCGGCTGCTACCATCTCTAGAACTCCTCGGAACATGAAAAGTGGAATGCTGCAGAAAAGCCCCCGTCTTATAAGTGGAAAGTTTTCTCGCCCACTATCCCATAAGTCAGATGATGGGATTACTATTGATCACCTGCACAAGCTGAATCCGAAAAATGTCTCCGCCTGGAATATGAAAAGGTTGATGAATATGGTCCGGCACGGCACTCTTTCTACACTGGATGAGCAAATACTTGATTCAACTGAAGATGATGAAAATGCCACACAGATTAGAAGTGAAAATGAGGCAAAAGCTGCGGCAAAGAAAATATTTCAGAATGTTGCCAGGCGGGGTTGCAGGTTCATTTACCTGGAAGATTTGATGCGTTTTATGCGGGAAGATGAAGCTGAGAAAACCATGGATCTCTTCGAAGGAGCATCTGAGTCTGGGAAGATAAGCAAATCTGCCTTGAAGAACTGGGTGGTAAATGCCTTCAGAGAGAGGAGAGCACTTGCCTTGACATTAACTGATACCAAAACCGCAGTGAACAAACTTCATCGAATACTCAATTTTATAGTTGGCATCCTTGTACTGGTTATTTGGCTACTAATACTGGGAATTGCCACCACCAAATTTCTTCTCTTTGTGAGCTCACAACTTGTTTTGGTTGCGTTTATATTTGGAAATACCTGCAAGACGGTGTTTGAAGCAATTATTTTCTTATTTGTCATGCACCCATTTGATGTGGGAGATAGGTGTGAAATCGATGGGATCCAGATGGTTGTGGAAGAAATGAATATACTGACAACTATATTTTTAAGATATGACAATCAAAAAATAATCATTCCCAACAGCGTCCTAGCTACGAAGGCCATTCATAATTATTACCGGAGTCCTGACATGGGAGATGCTATTGATTTCTTCATACACGTTTCTACCCCAGCTGATAAGATTGCACTCATGAAACAAAGAATACATAGCTTCATCGATAACAAGAAGGAGCATTGGTATCCCGCATCATTTATAGTCTTCAGGGACCTGGAACAATTAAACATGATAAGGATATCGATTTGGCCAACTCATAGAATGAACCACCAAGATATGGGAGAAAGGTTTGTGAGAAGATCCCTTCTGATTGAAGAGCTGCTCAGGATATTCCGGGAGCTTGATATCCAGTATCGTCTTCTTCCTCTTGATATTAACATCAGAAGCATGCCTACCACTTCTGAACGGCTTCCACCCAGTTGGGCCACAATCACAAGTTGA 2814 0.4659 MASLRKSFKSYYSYKHPRNISDADSAHEQLPILLDQETSHDHPPLPSMTSTTSPHRPEVVLKIDEADQQQGGKIWRETSYDFWNNNGGDVNNTTASDGAASTSGNDGDSFDFRQGGEDPPSMLIGKFLHKQKASGDLSLDMDLEMEEFQHDYKLPPVEESPQQHPSSISKDLKVSFEEPTPNVVEPASDTVRRRYRESPAPTEVHKSPKSDQRGSPAVGDGEVVKCTSNASVERNLSLQRKSGLLKAAARNRSRLMDPPEEPERRSGRVGKSGQVFSGMLGRKGEDDEDDPFSEEDLPDEFRKTHFSIWVLLEWLSLILIVAALACTLSIPVLRNKILWKLRLWKWEVMILVLICGRLVSDWVIRILVFFIERNFLLRKRVLYFVYGVKKAVQNCLWLGFVLIAWHILFDKKVERETRGNALQYVTKVLVCFLVGTLVWLAKTLVVKVMASSFYTSTYFDRIQESLFNQFVIETLSGPPLIEIQKSEEEEQKLADEVQKLQNAGVNIPPELRATAFSTTKSPKAAATISRTPRNMKSGMLQKSPRLISGKFSRPLSHKSDDGITIDHLHKLNPKNVSAWNMKRLMNMVRHGTLSTLDEQILDSTEDDENATQIRSENEAKAAAKKIFQNVARRGCRFIYLEDLMRFMREDEAEKTMDLFEGASESGKISKSALKNWVVNAFRERRALALTLTDTKTAVNKLHRILNFIVGILVLVIWLLILGIATTKFLLFVSSQLVLVAFIFGNTCKTVFEAIIFLFVMHPFDVGDRCEIDGIQMVVEEMNILTTIFLRYDNQKIIIPNSVLATKAIHNYYRSPDMGDAIDFFIHVSTPADKIALMKQRIHSFIDNKKEHWYPASFIVFRDLEQLNMIRISIWPTHRMNHQDMGERFVRRSLLIEELLRIFRELDIQYRLLPLDINIRSMPTTSERLPPSWATITS 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0028 937 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 41 932 IPR016688 -
Mibi03g0028 937 MobiDBLite consensus disorder prediction 155 222 - -
Mibi03g0028 937 MobiDBLite consensus disorder prediction 189 210 - -
Mibi03g0028 937 Pfam Mechanosensitive ion channel 703 906 IPR006685 GO:0016020|GO:0055085
Mibi03g0028 937 Gene3D - 762 811 IPR023408 -
Mibi03g0028 937 PIRSF Memb_At2g17000 40 937 IPR016688 -
Mibi03g0028 937 MobiDBLite consensus disorder prediction 37 56 - -
Mibi03g0028 937 MobiDBLite consensus disorder prediction 253 268 - -
Mibi03g0028 937 Coils Coil 483 503 - -
Mibi03g0028 937 MobiDBLite consensus disorder prediction 86 122 - -
Mibi03g0028 937 FunFam Predicted mechanosensitive ion channel 762 811 - -
Mibi03g0028 937 SUPERFAMILY Sm-like ribonucleoproteins 752 811 IPR010920 -
Mibi03g0028 937 MobiDBLite consensus disorder prediction 42 56 - -
Mibi03g0028 937 MobiDBLite consensus disorder prediction 86 109 - -
Mibi03g0028 937 MobiDBLite consensus disorder prediction 248 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0028 Mibi-ChrMibi03 455547 459499 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0028 56 937 Mechanosensitive Ion Channel Family AT1G78610 58.178 0.0 966