Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0026 ATGGGAGTAATTAGGCGGCATTTGGAACTAAATCAAACCTTAGGAAGAAAGACAGCAGAAGCCGATGCGCTAGCCGTTGTTGTGTCACAGACTCCGCCCACGAGCAGCTCTCCTCGTTCAAGAAACTCCCCACGATCATTTCCCTCTTTATCATCATCTATGACCTCTACCACCTCCCCCCACAGCCCCGAGGTTGTCGTAAAAATCGACGAAGCTGACCCCGGAGGCCAACAACAGGGTGGCAAGATTTGGAGAGAAACCAGCTACGACTTCTGGAACAACAATGGAGGAGACGTCAACAACACTACTGCCACTGATGGCGCCGCTAGTACTAGTGGTAATGACGATGTTAGCTTTGATCCACCCTCGATGCTCATTGGTAAGTTCTTGCACAAACAGAAGGCTTGCGGTGGCCTCTCCCTCGATATGGATTTAGAGATGGAGGAGTTCCAGCATGACTACAAGCTCCCTCCCGTCGAAGAGTCTCCCCAGCAGCAGCTCAGTAACATCAAGGTCTCCTTCGAGGAACCCACTTCCAATGTTGTTGAGCCAGCCAGTGATACCGTTAGACGAAGGTGTAGGGAGTCGCCGGGTCCCACCGAAGTCCATAAATCCCCGAACAGCGATCAACCATGTGGTAATGGCGAGGTGGTGAGGTGTACATCAAACGCCTCTGTTGAGAGGAATCTTTCGTTGCAGAGGAAATCTGCTTTGCTGAAGGCCGCCGCCAGAAACAAGTCCAGATTGATGGACCCACCGGAGGAGCCCGAACGAAGGTCCGGTCGGGTGGGAAAGTCAGGGCAAGTGTTTTCGGGGATGTTAGGGAGGAAAGGTGAGGACGACGAGGACGACCCATTTTTGGAGGAGGACTTGCCCGATGAGTTCAGGAAGACCCATTTTAGCATATGGGTTCTGCTTGAGTGGTTGAGTTTGATTTTGATCGTTGCTGCGCTGGCATGCACGCTGAGTATCCCAGTTTTGAGGAATAAGTTTCTCTGGAAGCTTCGTTTATGGAAATGGGAGGTGATGATCCTGGTTCTTATTTGTGGGCGCTTGGTTTCTGACTGGGTCATTCGGATTTTGGTCTTCTTCATCGAAAGGAATTTCCTTTTGCGGAAGAGGGTCCTCTATTTTGTTTACGGTGTGAAGAAGGCGGTCCAAAATTGTCTCTGGTTGGGATTCGTTTTGATTGCCTGGCATATATTATTCGATAAGAAGGTTGAGAGGGAGACTAGAGGCAACGCCCTTCAATATGTCACCAAGGTCCTGGTCTGTTTCTTGGTGGGTACTTTGGTATGGCTGGCAAAAACTCTTGTGGTTAAGGTTATGGCCTCTTCCTTCTATACAATCACGTATTTTGATAGGATTCAGGAGTCACTGTTTAATCAGTTTGTGATTGAAACGCTGTCGGGGCCTCCCCCGATCGAGATTCAGAAGTCGGAGGATGAGGAACAAAAACTTGCTGATGAGGTTCAGAAACTGCAGAATGCTGGGGTTAACATCCCTCCTGAGCTCAGGGCAACTGCCTTTTCCACGACCAAGAGTCCAAAGGCGGCTGCTACCAACTCTAGAACTCCTCGGACCATGAAAAGTGGAATGCTGCAGAAAAGCCCCCGTCTTATAAGTGGAAAGTTTTCTCGCCCACTCTCCCATAAGTCAGATGATGGGATTACTATTGATCACCTGCATAAGCTGAATCCCAAAAATGTCTCTGCCTGGAATATGAAAAGGTTGATGAATATGGTCCGGCACGGCACTCTTTCTACACTGGATGAGCATGCACTTGATTCAACTGAAGATGATGAAAATGCCACACATATTAGAAGTGAAAATGAGGCAAAAGCTGCGGCAAAGAAAATATTTCAGAATGTTGCCAGGCGGGGTTGCAGGTTCATTTACCTGGAAGATTTGATGCGTTTTATGCGGGAAGATGAAGCTGAGAAAGCCATGGATCTCTTCGAAGGAGCATCTGAGTCTGGGAAGATAAGCAAATCTGCCTTGAAGAACTGGGTGGTAAATGCCTTCAGAGAGAGGAGAGCACTTGCCTTGACATTGACTGATACCAAAACCTCAGTGAACAAACTTCGTCGAATACTCAATTTTATAGTTGCCATAGTTGTACTGGTTATTTGGCTGCTAATACTGGGAATTGCCACCACCAAATTTCTTCTCTTTGTGAGCTCACAACTTGTTTTGGTTGCGTTTGTATTTGGAAATACCTGCAAGACGGTGTTTGAAGCAATTATTTTCTTATTTGTCATGCACCCATTTGATGTGGGAGATAGGTGTGAAATCGATGGGATCCAGATGGTTGTGGAAGAAATGAATATACTGACAGCCATATTTTTAAGATATGACAATCAAAAAATAATCATTCCCAACAGCGTCCTAGCCACAAAGGCCATTCATAATTATTACCGGAGTCCTGACATGGGAGACGCTATTGATTTCTTCATACACGTTTCTACCCCAGCTGATAAGATTGCACTCATGAAACAAAGAATACATAGCTTCATCGATAACAAGAAGGAGCATTGGTATCCCTCATCATTTATAGTCTTCAGGGACCTGGAACAATTAAACATGATAAGGATATCGATTTGGCCAACTCATAGAATGAACCACCAAGACATGGGAGAAAGGTTTATGAGAAGATCCCTTCTGATTGAAGAGCTGCTCAGGATATTCCAGGAGCTTGACATCCAGTATCGTCTTCTTCCTCTCGATATTAACATCAGAAGCATGCCTACCACTTCTGAACGGCTTCCACCCAGTTGGGCCACAATCACAAGTTGA 2796 0.4649 MGVIRRHLELNQTLGRKTAEADALAVVVSQTPPTSSSPRSRNSPRSFPSLSSSMTSTTSPHSPEVVVKIDEADPGGQQQGGKIWRETSYDFWNNNGGDVNNTTATDGAASTSGNDDVSFDPPSMLIGKFLHKQKACGGLSLDMDLEMEEFQHDYKLPPVEESPQQQLSNIKVSFEEPTSNVVEPASDTVRRRCRESPGPTEVHKSPNSDQPCGNGEVVRCTSNASVERNLSLQRKSALLKAAARNKSRLMDPPEEPERRSGRVGKSGQVFSGMLGRKGEDDEDDPFLEEDLPDEFRKTHFSIWVLLEWLSLILIVAALACTLSIPVLRNKFLWKLRLWKWEVMILVLICGRLVSDWVIRILVFFIERNFLLRKRVLYFVYGVKKAVQNCLWLGFVLIAWHILFDKKVERETRGNALQYVTKVLVCFLVGTLVWLAKTLVVKVMASSFYTITYFDRIQESLFNQFVIETLSGPPPIEIQKSEDEEQKLADEVQKLQNAGVNIPPELRATAFSTTKSPKAAATNSRTPRTMKSGMLQKSPRLISGKFSRPLSHKSDDGITIDHLHKLNPKNVSAWNMKRLMNMVRHGTLSTLDEHALDSTEDDENATHIRSENEAKAAAKKIFQNVARRGCRFIYLEDLMRFMREDEAEKAMDLFEGASESGKISKSALKNWVVNAFRERRALALTLTDTKTSVNKLRRILNFIVAIVVLVIWLLILGIATTKFLLFVSSQLVLVAFVFGNTCKTVFEAIIFLFVMHPFDVGDRCEIDGIQMVVEEMNILTAIFLRYDNQKIIIPNSVLATKAIHNYYRSPDMGDAIDFFIHVSTPADKIALMKQRIHSFIDNKKEHWYPSSFIVFRDLEQLNMIRISIWPTHRMNHQDMGERFMRRSLLIEELLRIFQELDIQYRLLPLDINIRSMPTTSERLPPSWATITS 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0026 931 FunFam Predicted mechanosensitive ion channel 756 805 - -
Mibi03g0026 931 Coils Coil 477 497 - -
Mibi03g0026 931 MobiDBLite consensus disorder prediction 247 262 - -
Mibi03g0026 931 MobiDBLite consensus disorder prediction 243 283 - -
Mibi03g0026 931 Gene3D - 756 805 IPR023408 -
Mibi03g0026 931 SUPERFAMILY Sm-like ribonucleoproteins 746 805 IPR010920 -
Mibi03g0026 931 MobiDBLite consensus disorder prediction 178 216 - -
Mibi03g0026 931 MobiDBLite consensus disorder prediction 201 216 - -
Mibi03g0026 931 Pfam Mechanosensitive ion channel 697 901 IPR006685 GO:0016020|GO:0055085
Mibi03g0026 931 MobiDBLite consensus disorder prediction 95 116 - -
Mibi03g0026 931 MobiDBLite consensus disorder prediction 28 62 - -
Mibi03g0026 931 MobiDBLite consensus disorder prediction 512 531 - -
Mibi03g0026 931 PIRSF Memb_At2g17000 36 931 IPR016688 -
Mibi03g0026 931 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 45 926 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0026 Mibi-ChrMibi03 411795 416663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0026 64 931 Mechanosensitive Ion Channel Family AT1G78610 56.652 0.0 930