Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0025 ATGGCAATGGAGGGTAACGAGAGCCGAGCGAGCGGAGTGCAGGAAACAGCGTCGTCTCCCGCTCAAAACCGCCAACAGAGACAGAAGCTTGAAGTGTACAATGAGGTCCTTCGTCGCCTCAAGGATTCTGACCACGAAGAGGCTATGCAGCCTAACTTCCAACATCAGCTCTGGGCTCATTTCAGCCGACTTCCTACACGGTATGCATTGGATGTGAACGTGGAAAGGGCTGCGGATGTTCTGATGCACAAGAGACTACTGCATTTAGCACAAGTTCCTGCTAATAGGCCTGCGATTGAAGTTCGCCTGGTCCAGGTTCAACCCATATCTGACGGAAGCTTGGATGATTCTGTCCATTCAGAAGCTCCTGGTGAGGAAACTGGTCAAATCTCTTCAAAGCACTCAGGGAGACAGAGTATTCATCCACCTCCTGCTTTTGGTTCTTCTCCAAACCTTGAAGCCCTGTCACTTGAAGCAACTAAGAGTGAAGATTTAGAGGTGGAACACTCTATACATGCTGGTGGACAATATTCACGGCCCATGCATGAAATCACCTTCTCAACAGAAGACAAGCCAAAGCTTCTCAGTCAGTTAACTTCTTTGCTTTCTGAGATTGGACTGAACATTCAAGAGGCACATGTTTTTTCCACAAGCGATGGTTATTCATTAGATGTGTTTGTTGTTGATGGATGGCCATATGAGGAAACAGAACGACTTAAAGCAGTTTTGGAGAAAGAAGTTTTAATAATTGAGAGTCTGGCATGGCCCATTCAATCAGTACCTTCTGTTGATGAGCCCTATGTGAAATGTGAATCCGATTATTTGACAATACCTAATGATGGGATGGATGTTTGGGAAATAGATCCTAAACATTTGAAATTTGGAAGTAAAATTGCATCTGGATCATATGGTGATCTATTTAAAGGTACATACTGTAGCCAGGAAGTAGCGATCAAAGTTCTCAAAGCTGAGAACGTAAATTCAGATTTACAGAGGGAGTTTTCCCAGGAAGTCTATATCATGAGAAAGGTTCGGCACAAGAATGTTGTGCAATTTATAGGGGCATGTACCAAGGCCCCAAGTTTGTGCATAGTAACAGAATTTATGTCTGGCGGAAGTGTGTATGACTACTTGCATAAGCAAAAGGGTGTTTTCAAATTTCCATCCTTGCTCAAAGTAGCAATTGATGTTTCTAAGGGAATGAATTACTTGCACCAAAATGACATCATCCACAGAGATTTGAAGGCTGCAAATCTTTTGATGGGTGAAAATTCTGTGGTCAAGGTTGCTGATTTTGGGGTTGCTAGAGTGAAATCTAAATCTGGAGTTATGACAGCCGAAACTGGAACTTATCGATGGATGGCTCCCGAGGTTATTGAACACAAGCCATATGATCATAAGGCCGATATATTTAGTTTTGGGGTTGTTTTATGGGAATTGCTAACCGGAAAGATTCCGCATGAGAATTTGACTCCACTACAGGCAGCTATAGGAGTGGTTCAAAAGGGTCTACGACCCGCAATCCCCAATAATACCCATCCAAAACTTGTTGAGCTTCTTGAGAGATGTTGGCAGCCAGATCCAACGCTAAGACCTGATTTCTCTGAAATTATAGACATTCTGCAACAATTGGCTAAAGAGGTTGGAGATGGAGAGGATCCACGAAAAGAAAAATCTGGAGGAATCTTCTCTGCCCTCAGACGAGGTCATCACTGA 1716 0.4347 MAMEGNESRASGVQETASSPAQNRQQRQKLEVYNEVLRRLKDSDHEEAMQPNFQHQLWAHFSRLPTRYALDVNVERAADVLMHKRLLHLAQVPANRPAIEVRLVQVQPISDGSLDDSVHSEAPGEETGQISSKHSGRQSIHPPPAFGSSPNLEALSLEATKSEDLEVEHSIHAGGQYSRPMHEITFSTEDKPKLLSQLTSLLSEIGLNIQEAHVFSTSDGYSLDVFVVDGWPYEETERLKAVLEKEVLIIESLAWPIQSVPSVDEPYVKCESDYLTIPNDGMDVWEIDPKHLKFGSKIASGSYGDLFKGTYCSQEVAIKVLKAENVNSDLQREFSQEVYIMRKVRHKNVVQFIGACTKAPSLCIVTEFMSGGSVYDYLHKQKGVFKFPSLLKVAIDVSKGMNYLHQNDIIHRDLKAANLLMGENSVVKVADFGVARVKSKSGVMTAETGTYRWMAPEVIEHKPYDHKADIFSFGVVLWELLTGKIPHENLTPLQAAIGVVQKGLRPAIPNNTHPKLVELLERCWQPDPTLRPDFSEIIDILQQLAKEVGDGEDPRKEKSGGIFSALRRGHH 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0025 571 ProSiteProfiles Protein kinase domain profile. 292 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0025 571 SUPERFAMILY Protein kinase-like (PK-like) 274 541 IPR011009 -
Mibi03g0025 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672|GO:0006468
Mibi03g0025 571 MobiDBLite consensus disorder prediction 124 145 - -
Mibi03g0025 571 Gene3D Transferase(Phosphotransferase) domain 1 371 559 - -
Mibi03g0025 571 FunFam Serine/threonine-protein kinase isoform 1 282 370 - -
Mibi03g0025 571 CDD STKc_MAP3K-like 298 541 - -
Mibi03g0025 571 ProSiteProfiles ACT domain profile. 183 265 IPR002912 -
Mibi03g0025 571 Coils Coil 23 43 - -
Mibi03g0025 571 SUPERFAMILY ACT-like 181 245 IPR045865 -
Mibi03g0025 571 MobiDBLite consensus disorder prediction 1 29 - -
Mibi03g0025 571 MobiDBLite consensus disorder prediction 548 571 - -
Mibi03g0025 571 MobiDBLite consensus disorder prediction 112 151 - -
Mibi03g0025 571 PRINTS Tyrosine kinase catalytic domain signature 366 379 IPR001245 GO:0004672|GO:0006468
Mibi03g0025 571 PRINTS Tyrosine kinase catalytic domain signature 512 534 IPR001245 GO:0004672|GO:0006468
Mibi03g0025 571 PRINTS Tyrosine kinase catalytic domain signature 449 459 IPR001245 GO:0004672|GO:0006468
Mibi03g0025 571 PRINTS Tyrosine kinase catalytic domain signature 468 490 IPR001245 GO:0004672|GO:0006468
Mibi03g0025 571 PRINTS Tyrosine kinase catalytic domain signature 403 421 IPR001245 GO:0004672|GO:0006468
Mibi03g0025 571 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 131 547 - -
Mibi03g0025 571 Gene3D Phosphorylase Kinase; domain 1 281 370 - -
Mibi03g0025 571 MobiDBLite consensus disorder prediction 548 564 - -
Mibi03g0025 571 MobiDBLite consensus disorder prediction 9 29 - -
Mibi03g0025 571 SMART serkin_6 292 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0025 571 Pfam Protein tyrosine and serine/threonine kinase 292 540 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0025 Mibi-ChrMibi03 386889 401103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0025 4 570 MAP Kinase Kinase Kinase AT4G35780 63.415 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mibi03g0025 PK_Tyr_Ser-Thr 2.8e-73 CL0016