Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0013 ATGGGTTGCTGCCCATCTTCATTTCAGACCGAAACTCACCCAGAAAAGCAGCAGAATCAACAACAGCCCCCTCACCACCATGTTCACACTCACAACCACAACCACAACCACATCCATACCCAACCTCACCCGCCACCCTCTCTCACCGCCGACCCATCCGCCGCCGGTGGGGTCCCCTCTTTCTCCGAGTTCTCTTTCTCCGACCTCAAAGCTGCCACCAATAATTTCAGCTCCGACTTTATTGTGTCTGAGAGTGGAGAGAAAGCACCCAACCTTGTCTACAAAGGTCGCCTCCCCAACCGCCGCTGGATTGCCGTCAAGAAGTTCACCAAGGCTGCATGGCCCGATCCCAAGCAATTTGTGGATGAGGCATCAGGTGTTGGAAAATTGCGACATCGCAGGCTTGCTAATTTGATTGGCTACTGCTGTGATGGAGATGAGAGGCTCCTTGTTGCAGAATACATGCCCAATGACACACTCGCTAAGCATCTTTTCCACTGGGAAAATCAGACCATTGAGTGGGCCATGCGCTTAAGAGTGGCTCTTTCCATTGCAGAAACTTTAAATTACTGTAGTTCTGAGGGTCGCCCATTGTACCATGATTTGAATGCTTATAGGGTTCTTTTCGATGAGGAAGGTGATCCACGTCTGTCATGTTTCGGTTTGATGAAGAACAGTAGGGATGGAAAAAGTTATAGCACGAATCTCGCTTACACACCTCCTGAGTACTTAAGAAATGGAAGGGTCACTCCTGAAAGTGTCATTTACAGCTTTGGTACTGTTCTCCTAGACCTACTAAGTGGAAAGCACATCCCTCCAAGTCATGCACTTGACATGATACAGGGGAAGGCCAACATGCTTCTTATGGATTCTCATTTAGAGGGGAAGTTCTCTAAAGAAGAGGCGGCAGTAGTTGTCAATCTGGCGTCTAAATGTTTGCAATATGAACCCAGGGAGCGGCCTGATACAAAGGAATTAGTCTCAACACTTGCTCCATTGCAAACAAAACCTGATGTACCTTCTTATGTTATGCTTGGGATTCCGAAGCATGAGGAAACTCCATCAACCCCACAGCGCCCGCTTTCAGCCATGGGTGAGGCTTGTTCAAGGATGGACCTCACTGCAATACATCAGATCTTGGTTGCAACGCACTACAGAGATGACGAAGGGACTAATGAGTTGTCTTTCCAAGAGTGGACCCAACAGATGAGGGATATGTTGGAAGCAAGGAAACGTGGAGACTATGCATTCCGTGACAAAGACTTCAAGACAGCAATTGAAAATTATTCACAGTTTATCGATGTGGGAACAATGGTGTCACCAACGGTCTTTGCTCGGCGCAGTCTATGCTATCTGTTATGCGATCAACCAGATCCTGCTCTGAGAGATGCAATGCAAGCACAATGTGTTTATCCAGACTGGCCTACTGCATTCTACATGCAATCGGTTGCTCTAGCAAAGCTTGACATGCAAAAGGACGCTGCTGATATGTTGAATGAGGCTACTGCTTTGGAAGAAAAGAGGCAAAGAGGAGGTAGAGGCGCATAG 1548 0.4774 MGCCPSSFQTETHPEKQQNQQQPPHHHVHTHNHNHNHIHTQPHPPPSLTADPSAAGGVPSFSEFSFSDLKAATNNFSSDFIVSESGEKAPNLVYKGRLPNRRWIAVKKFTKAAWPDPKQFVDEASGVGKLRHRRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALSIAETLNYCSSEGRPLYHDLNAYRVLFDEEGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHALDMIQGKANMLLMDSHLEGKFSKEEAAVVVNLASKCLQYEPRERPDTKELVSTLAPLQTKPDVPSYVMLGIPKHEETPSTPQRPLSAMGEACSRMDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFKTAIENYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYMQSVALAKLDMQKDAADMLNEATALEEKRQRGGRGA 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0013 515 MobiDBLite consensus disorder prediction 1 55 - -
Mibi03g0013 515 SUPERFAMILY TPR-like 407 508 IPR011990 GO:0005515
Mibi03g0013 515 MobiDBLite consensus disorder prediction 1 25 - -
Mibi03g0013 515 SUPERFAMILY Protein kinase-like (PK-like) 60 340 IPR011009 -
Mibi03g0013 515 FunFam probable serine/threonine-protein kinase At5g41260 156 347 - -
Mibi03g0013 515 FunFam probable serine/threonine-protein kinase At4g35230 51 154 - -
Mibi03g0013 515 Pfam Protein tyrosine and serine/threonine kinase 94 330 IPR001245 GO:0004672|GO:0006468
Mibi03g0013 515 Gene3D Transferase(Phosphotransferase) domain 1 156 346 - -
Mibi03g0013 515 Gene3D Phosphorylase Kinase; domain 1 54 154 - -
Mibi03g0013 515 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 3 510 IPR045845 GO:0004672|GO:0009742
Mibi03g0013 515 ProSiteProfiles Protein kinase domain profile. 79 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0013 515 Coils Coil 487 507 - -
Mibi03g0013 515 FunFam probable serine/threonine-protein kinase At4g35230 404 513 - -
Mibi03g0013 515 Gene3D Tetratricopeptide repeat domain 404 512 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0013 Mibi-ChrMibi03 266855 273472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0013 64 342 Glycoside Hydrolase AT3G07070 35.948 2.43e-45 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Mibi03g0013 PK_Tyr_Ser-Thr 4.9e-26 CL0016