Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g0001 ATGGGGATTTGCTGGGGTTCTCCAGCTGACAACCCAAGCATCACCAGCACATCTGATCACCTTAGTGCAGCTACAACGGGAACATCCCGAACTACCAGCAATACTACTACTGCTACTACATCTTATGGGAGTGGAAGCATCAGCCAATTTTCCGAATCCAGTGGTGGTGAAGCTTATCCAAATGGGCAGATTTTGCCTACTGCAAATTTAAGGATATTCACTTTTGCGGAATTGAAGGCTGCGACTAAGAATTTTAGAGTTGATACAGTGCTTGGAGAGGGAGGTTTTGGAAAGGTCTTCAAAGGTTGGCTTGAAGAAAAGGCAACGCCAAAAAATGGAAGTGGAACAGTAGTTGCCGTTAAAAAATTGAACTCAGAGAGCTTACAAGGATTTGAGGAATGGCAGTCGGAAATAAATTTTCTGGGACGGCTTACTCATCCTAACCTCGTTAAGCTGTTAGGATACTGTTGGGAAGAAAATGAGCTTCTTCTCGTCTATGAGTTCATGCAAAAAGGCAGCTTGGAAAATCATCTATTTGGAAGGGGTTCTGCCGTTCAACCACTTCCATGGGACATTAGGCTTAAGATTGCAATTGGAGCAGCTCGTGGTTTGGCATTCTTGCACACATCTGAGAAAGTAATTTACCGTGATTTCAAGGCCTCCAATATATTGCTCGATGGGTCTTATACAGCTAAGATTTCAGACTTCGGCTTGGCTAAATTGGCACCTTCAGCTAGTCGGTCCCATGTAACAACAAGGGTGATGGGCACGTTTGGCTATGCGGCTCCCGAGTATGTGGCAACAGGGCATCTGTACGTGAAGAGTGATGTGTATGGATTTGGAGTTGTTTTGGTTGAGATGCTGACAGCCCTTCGGGCACTAGATCAAAACCGCCCCAGCGGCCAACATAATCTTGTGGACTGGGTGAAACCTTACTTACAAGATGGAAGAAAATTGAAAAGCATAATGGATTCACGGCTGGAGGGAAAATATCCATCCAAATCTGCATTTCGTATAGCTCTACTTGCTTTAAAATGTCTTGCATTAGAGCCTAAACACCGGCCATCAATGAAGGAAGTTTTGGAGAGCTTGGAGAGGATTCAAGCTGCCAATGATAGGCCTGTGGAGCCTAGATTCCGTTCTAATCGTAACGTGGCTACCCATGTTTCCCGGCCTCTACGTCCTCGATCCCACTGA 1197 0.4536 MGICWGSPADNPSITSTSDHLSAATTGTSRTTSNTTTATTSYGSGSISQFSESSGGEAYPNGQILPTANLRIFTFAELKAATKNFRVDTVLGEGGFGKVFKGWLEEKATPKNGSGTVVAVKKLNSESLQGFEEWQSEINFLGRLTHPNLVKLLGYCWEENELLLVYEFMQKGSLENHLFGRGSAVQPLPWDIRLKIAIGAARGLAFLHTSEKVIYRDFKASNILLDGSYTAKISDFGLAKLAPSASRSHVTTRVMGTFGYAAPEYVATGHLYVKSDVYGFGVVLVEMLTALRALDQNRPSGQHNLVDWVKPYLQDGRKLKSIMDSRLEGKYPSKSAFRIALLALKCLALEPKHRPSMKEVLESLERIQAANDRPVEPRFRSNRNVATHVSRPLRPRSH 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g0001 398 ProSitePatterns Protein kinases ATP-binding region signature. 91 122 IPR017441 GO:0005524
Mibi03g0001 398 MobiDBLite consensus disorder prediction 15 54 - -
Mibi03g0001 398 Pfam Protein tyrosine and serine/threonine kinase 87 364 IPR001245 GO:0004672|GO:0006468
Mibi03g0001 398 ProSiteProfiles Protein kinase domain profile. 85 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g0001 398 CDD STKc_IRAK 91 367 - -
Mibi03g0001 398 Gene3D Phosphorylase Kinase; domain 1 69 168 - -
Mibi03g0001 398 Gene3D Transferase(Phosphotransferase) domain 1 169 387 - -
Mibi03g0001 398 SUPERFAMILY Protein kinase-like (PK-like) 69 387 IPR011009 -
Mibi03g0001 398 PANTHER OS01G0588500 PROTEIN-RELATED 35 368 - -
Mibi03g0001 398 MobiDBLite consensus disorder prediction 372 398 - -
Mibi03g0001 398 FunFam Serine/threonine-protein kinase BIK1 52 168 - -
Mibi03g0001 398 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 169 376 - -
Mibi03g0001 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g0001 Mibi-ChrMibi03 34514 39104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g0001 62 368 Receptor kinase-like Gene Family AT4G02010 51.447 2.05e-102 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi03g0001 PK_Tyr_Ser-Thr 2.1e-47 CL0016