Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3508 ATGTCAAGAATAATGGCAGACAAGAAGTTGGGGGCAGGACGAGTGGTGGCTGTGGCTATTGAGAACAACAAGACAAGCCAGTATGCTGCAAAATGGGCTGTTGATAATCTTGTTCCCAGAGATCAATCCGGGCATCTTATACCCATCGATTCCAACGATGATGTGGCAAGAGCATACAGGCAGCAAGCGGACACCGAATCCAGGGAGCTTTTTGCCTCATTCCACAATATTGAATTGCAACAGGTACAATGCAAAGAAGTGTTGATGGAAGACACCGATATAGCTAAAGCCTTGATAGAATGTGTGTCAGGGCATTCAGTTGAGCTTCTGGTACTTGGGGCACCATCAAGAAGTGGTATTGTGAGGACAAGTGATGTGGGGAGCCAAGTGTCAAAAGGAGCACCGCCATTCTGCACAGTGTATATAGTTTCCAAAGGAAAAATAGCATCGGTGCGAGCTGCTTCAGGTCCACTACCAGCAGCCAAAGCAACATCTCGCAGTGCACTGCAGCAACAATGCAGCCCAAATCCTGACAGGCTCGACGCCCAACTGGTTCGCAGCTTGACGCCACGCTCAGCAGAGCGGCCTGATGATGACATCAAGTCGCCATTCACAAGAGGTGGTATATGGAGCCACAAACCACCGCACGAATCCTCAATCCCAGACTGTGATATATCATTTGTGAGCAGTGGAAGGCCCGGCACGGATCGCATCCATGATAACGCCAACCATCCTGGAATGGCCCCTCGCCTTTCGAACACCTGTGATTCTGACTCTTCTTTCTCTGCCACTAGGTCCATTCATGACATCAATTATTCTCATCCTGACATCTCATTCAGCTCCCAAGACAGTGGCGCCTCTTCCTCCAGATTGTCCCTCACGGACGATGTGGAAGCAGAGATGAGAAGACTGAAGCTCGAACTGAAGCAAACCATGGAAATGTACAGTTCAGCCTGCAAGGAAGCTCTCACTGCAAGGCAGAAGGCAGTGGAGCTTCAACGATGGAAATTAGAAGAGCAAAAGAGATTAGAAGAGGCGAGGATGAATGAAGAAGCGGCACTCGCAGTTGCAGAGAGAGAGAAAGCAAAGTGTAGGGCAGCCCTGGAGGCAGTAGAAGCATCTAAGAAAGCTGCGGAACTGGAGGCACAAAAAAGAACGGACGCAGAGATGAAAGAAAGTGAGCAGAAGAAGAAGACACCAGACACTTTTTCACAGTGCAGTGCCAGATACAGAAGATATAGCATTCAGGAAATCGAAGAGGCAACTCAATGTTTTGCGGAGTCGCTGAAGATCGGGGAAGGAGGGTATGGGCCAGTATATAGGTGTGAGCTAGATCTGACGCCAGTTGCGGTCAAAGTATTAAGGCCAGACGCAGCTCAAGGAAGGTCACAGTTTCAGCAAGAGGTGGAGGTGTTGAGCTGCATAAGGCATCCAAACATGGTTCTGCTGCTGGGAGCATGCCCAGAGTATGGGTGCCTAGTGTACGAGTACATGGCTAACGGAAGTCTGGAGGACTGCCTTTTCCGAAAACGTAACTCCCCACTTCTTCCCTGGCAGCTCAGATTCCGAATAGCGGCGGAGATCGCCACCGGCCTCCTCTTCCTCCACCAGACAAAGCCAGAGCCCCTGGTTCACCGTGACCTCAAGCCCGCCAACATTTTGCTGGATCGCAACTTCGTCAGCAAGATCAGTGACGTGGGACTGGCCAGGCTTGTGCCTCCTTCCGTGGCGGACACCGTCACGCAGTACCACATGACATCCACGGCGGGAACATTCTGTTACATAGACCCAGAGTACCAGCAAACAGGCATGCTGGGGATCAAGTCTGATGTCTACTCCCTTGGGATCATGCTCCTACAGATGATAACGGCGAAGCCTCCCATGGGTTTGACCCATCATGTCGGACGAGCTATAGAGAACGGCACATTCGGGGACATGCTTGACCCTGCTGTTCAGGACTGGCCCCTGCAGGAGGCCCTCCACTTTGCCAAGCTTGCCCTGCACTGTGCGGAAATGAGGAGAAAGGACAGACCTGATCTTAAAAAAGTTGTATTGCCTCAGCTCAATATCTTGAGAGACTTTGCCGAAAATAACATGCCCCCCACCATCATGTTTGCCCGTACTCCGGGATTCGCCCCCACCAGCACTTCCACAACCTCTACGATTCAAGATTTGTTGAATGAGTCGTCCCAGTCACTCTCTGGAATCTCCGGATATGAAAGCCGCTCCAGCACATCCTCGTTGGGGAGAATATGA 2256 0.5111 MSRIMADKKLGAGRVVAVAIENNKTSQYAAKWAVDNLVPRDQSGHLIPIDSNDDVARAYRQQADTESRELFASFHNIELQQVQCKEVLMEDTDIAKALIECVSGHSVELLVLGAPSRSGIVRTSDVGSQVSKGAPPFCTVYIVSKGKIASVRAASGPLPAAKATSRSALQQQCSPNPDRLDAQLVRSLTPRSAERPDDDIKSPFTRGGIWSHKPPHESSIPDCDISFVSSGRPGTDRIHDNANHPGMAPRLSNTCDSDSSFSATRSIHDINYSHPDISFSSQDSGASSSRLSLTDDVEAEMRRLKLELKQTMEMYSSACKEALTARQKAVELQRWKLEEQKRLEEARMNEEAALAVAEREKAKCRAALEAVEASKKAAELEAQKRTDAEMKESEQKKKTPDTFSQCSARYRRYSIQEIEEATQCFAESLKIGEGGYGPVYRCELDLTPVAVKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLEDCLFRKRNSPLLPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADTVTQYHMTSTAGTFCYIDPEYQQTGMLGIKSDVYSLGIMLLQMITAKPPMGLTHHVGRAIENGTFGDMLDPAVQDWPLQEALHFAKLALHCAEMRRKDRPDLKKVVLPQLNILRDFAENNMPPTIMFARTPGFAPTSTSTTSTIQDLLNESSQSLSGISGYESRSSTSSLGRI 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3508 751 MobiDBLite consensus disorder prediction 382 401 - -
Mibi02g3508 751 ProSitePatterns Serine/Threonine protein kinases active-site signature. 543 555 IPR008271 GO:0004672|GO:0006468
Mibi02g3508 751 Coils Coil 294 314 - -
Mibi02g3508 751 CDD STK_N 15 146 - -
Mibi02g3508 751 SMART serkin_6 425 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g3508 751 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 397 497 - -
Mibi02g3508 751 PANTHER OS02G0152300 PROTEIN 15 727 - -
Mibi02g3508 751 Coils Coil 340 381 - -
Mibi02g3508 751 FunFam U-box domain-containing protein 51 498 698 - -
Mibi02g3508 751 MobiDBLite consensus disorder prediction 382 399 - -
Mibi02g3508 751 Gene3D HUPs 14 143 IPR014729 -
Mibi02g3508 751 MobiDBLite consensus disorder prediction 187 222 - -
Mibi02g3508 751 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 142 - -
Mibi02g3508 751 Pfam Protein kinase domain 428 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g3508 751 Gene3D Phosphorylase Kinase; domain 1 393 497 - -
Mibi02g3508 751 SUPERFAMILY Protein kinase-like (PK-like) 402 684 IPR011009 -
Mibi02g3508 751 Gene3D Transferase(Phosphotransferase) domain 1 498 699 - -
Mibi02g3508 751 ProSiteProfiles Protein kinase domain profile. 425 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3508 Mibi-ChrMibi02 61562751 61566514 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3508 6 719 Receptor kinase-like Gene Family AT1G78940 54.240 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mibi02g3508 Pkinase 1.8e-39 CL0016