Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3493 ATGGCTAGGAAGTGTTCACATTGTGGGAACATAGGCCACAATTCAAGGACTTGCACTTCTTCTTCAGCATCATCCATGAGGGGTGCTTTTGTAGGGCTTAGACTCTTTGGTGTTCAACTGGACATATCCTCTTCTTCCTCTTCTTATTCATCTAGTGCTGCCATCAAGAAAAGCTTCAGCATGGACTCCTTGCCCTCCTCCTCCTCATCCCCTTCCTCTTCCTCTTTCTCCTCCTCCACCACCACCAACAGATTAACCATTGAGGAAATCTCCGAGAGGACCTCCCTCGGCTATCTCTCCGACGGCCTCCTCGGCCCAGTCCAAGACCGCAAGAAAGGAGTGGCATGGACAGAAGAGGAGCATAGGGCATTCCTGGTAGGGCTGGAGAAGCTGGGGAAGGGGGACTGGAGAGGCATCTCAAGGAAGTATGTGACCAGCAGAACCCCCACTCAAGTCGCCAGCCACGCTCAGAAATACTTCCTCCGCCTCTCCTCCCTTCACACCAAGAAGCGTCGCTCCAGCCTTTTCGATTTGGTTGGGAGCACTACTCAATTAGGCCATCCTGCTCCTAATAATAAGGCAGCCCATTCACCATTATCGGTGGGGAATATGGAGACTGATTTGCAGGTTGTTGGGCTTCATAAAATGGAGGAACCCAACAAATCATCATCTGATGATGATAAGCCAATTCCTGAGAATAATAATGATCATTATCATTCTCAACAACAACATGATGAGTTGAAATCTTCCGATGCCTCATCACCACTTGATCTGGAGCTCACTCTTGCTGCCCCCAACAATAATGACAATACTCTCCGCCAGCAGCAAAATACCCTTCTTGTTGGTCCAATCATCACCGTCACTTGA 867 0.4913 MARKCSHCGNIGHNSRTCTSSSASSMRGAFVGLRLFGVQLDISSSSSSYSSSAAIKKSFSMDSLPSSSSSPSSSSFSSSTTTNRLTIEEISERTSLGYLSDGLLGPVQDRKKGVAWTEEEHRAFLVGLEKLGKGDWRGISRKYVTSRTPTQVASHAQKYFLRLSSLHTKKRRSSLFDLVGSTTQLGHPAPNNKAAHSPLSVGNMETDLQVVGLHKMEEPNKSSSDDDKPIPENNNDHYHSQQQHDELKSSDASSPLDLELTLAAPNNNDNTLRQQQNTLLVGPIITVT 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3493 288 MobiDBLite consensus disorder prediction 218 252 - -
Mibi02g3493 288 Gene3D - 114 166 - -
Mibi02g3493 288 CDD SANT 115 160 IPR001005 -
Mibi02g3493 288 FunFam transcription factor MYB1R1 114 165 - -
Mibi02g3493 288 SMART sant 112 162 IPR001005 -
Mibi02g3493 288 ProSiteProfiles Myb-like domain profile. 108 160 IPR001005 -
Mibi02g3493 288 MobiDBLite consensus disorder prediction 218 253 - -
Mibi02g3493 288 Pfam Myb-like DNA-binding domain 115 160 IPR001005 -
Mibi02g3493 288 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 111 162 IPR006447 GO:0003677
Mibi02g3493 288 MobiDBLite consensus disorder prediction 183 202 - -
Mibi02g3493 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 164 IPR017930 -
Mibi02g3493 288 SUPERFAMILY Homeodomain-like 109 165 IPR009057 -
Mibi02g3493 288 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Mibi02g3493 288 PANTHER TRANSCRIPTION FACTOR KUA1 3 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3493 Mibi-ChrMibi02 61318318 61319447 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi02g3493 Myb_DNA-binding 4.2e-11 CL0123