Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3492 ATGATCCCAGTTGAGAGAGGTTCTTCAGATGTCACCGGAAAAGTGGTGGTGGTGGCTGTCAGAGCGTCGAAGGAGATTTCAAGGACTGCTTTAGTATGGGCTCTCACTCATGTTGTTCAACCTGGTGATTGCATTAAACTCTTGGTCCTCATTCCAGCTCTCTCCACAAGTAAAAGGATGTGGGGCCTTTCGAGATTTACCACTGATTGTACAACCAGTCACTGGAGATCCCAAACTGCTTCAGAGCAGAAGGAAATAATTGCCAGTTCATGTTCTGAATTGATGCTACAACTCCATGAATTTTATGATCCAGAAAAGCTAAGAGAGCTCAATCAAGCTGGGTTATATTGGACAAGAAAATGGCATTTGTTGGTAATTTTATCATTAACTGCAACTGACATTGGAACTTCATCAATATCAAGCTCAGATCCTGGGACGTCACCATTTTTCCTCTCTGATATGTATGGGAGACAAAGAAGAGAAACCTTTGTTCATGATGACGTTAAAAATTTGGAGGAAAGTGAATCTGACTCTGAGAGTGAAAAGTTGAGTTTATCATCCAAAAGTTCATATTTTGAGCCATGGGCTGCAAATGTAATGTGCACTGATGGAGAATTTTCAAAACACAGTGGCAGTACACAACGATCCAGTGACAAGTCCTTGGTGTCTGCCTATGAAACCTTGCTTCAAAAAGTCTCCAACTTGGATCAAGAACCTGGTCTAGGACTACTTCGTTGTAAAATTGATGTGAACTTGAGCAAAAGTGTTAGAGAAGCAATTTCCCTGTCAAGGAATGCGCCCCTTGGCCCTCCTCCATTGTGCTCTATTTGTCAGCACAAGGGGCCAGTATTCGGGAATCCTCCAAGGTGGTTTACATATGCTGAGCTGCAACTTGCCACAGGGGGGTTTTCACAAGCAAATTTCCTAGCTGAAGGGGGGTTTGGTTCTGTGCACCGTGGTGTCCTACCTGATGGGCAGGTTATTGCTGTGAAGCAATATAAATTGGCCAGTACTCAAGGTGATAAAGAATTTTGCTCAGAAGTTGATGTATTAAGCTGTGCACAACACCGTAACGTTGTGATGCTGATCGGATTTTGTGTGGAGGATGGAAGAAGATTGCTAGTTTATGAATATATCTGCAATGGGTCTTTAGATTCCCATCTTTATGGGCGAAACAAGAATGTATTGGGATGGTCTGAAAGGCAAAAGGTTGCAGTCGGAGCTGCTCGAGGTTTGAGATACCTTCATGAAGAATGTCGAGTGGGTTGTATCGTGCACAGAGACATGCGGCCTAACAATATACTCCTAACTCATGATTTTGAAGCTCTTGTGGGAGATTTTGGACTTGCTAGATGGCAGCCAGATGGAGATATAGGTGTCGAAACTAGGGTGATTGGAACATTTGGGTATTTGGCCCCAGAATATGCTCAAAGTGGCCAAATTACTGAAAAAGCTGATGTGTATTCCTTTGGGGTAGTGCTGCTGGAACTTGTCACAGGATGGAAAGCTATTGATATAAATCGGCCTAGAGGTCAGCAATGCCTCACTGAATGGGCACGGCCATTGCTTGAAAGAGATGCCATCCATGAACTGATTGATCCAAGGTTGAAAAACTGCTATACAGATCAAGAGGTTCATCGCATGATGTTATGTTGTTCAATGTGTCTACGGCAGGATCCTCATTTTAGGCCTAGAATGTCGCAGGTGCTTCGGATGCTGGAAGAAGATGACATTCCCATGTGA 1743 0.436 MIPVERGSSDVTGKVVVVAVRASKEISRTALVWALTHVVQPGDCIKLLVLIPALSTSKRMWGLSRFTTDCTTSHWRSQTASEQKEIIASSCSELMLQLHEFYDPEKLRELNQAGLYWTRKWHLLVILSLTATDIGTSSISSSDPGTSPFFLSDMYGRQRRETFVHDDVKNLEESESDSESEKLSLSSKSSYFEPWAANVMCTDGEFSKHSGSTQRSSDKSLVSAYETLLQKVSNLDQEPGLGLLRCKIDVNLSKSVREAISLSRNAPLGPPPLCSICQHKGPVFGNPPRWFTYAELQLATGGFSQANFLAEGGFGSVHRGVLPDGQVIAVKQYKLASTQGDKEFCSEVDVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRNKNVLGWSERQKVAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGDIGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLLELVTGWKAIDINRPRGQQCLTEWARPLLERDAIHELIDPRLKNCYTDQEVHRMMLCCSMCLRQDPHFRPRMSQVLRMLEEDDIPM 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3492 580 Gene3D Phosphorylase Kinase; domain 1 276 378 - -
Mibi02g3492 580 Pfam Protein tyrosine and serine/threonine kinase 307 573 IPR001245 GO:0004672|GO:0006468
Mibi02g3492 580 Gene3D Transferase(Phosphotransferase) domain 1 379 578 - -
Mibi02g3492 580 PANTHER OS01G0750732 PROTEIN 89 576 - -
Mibi02g3492 580 CDD STKc_IRAK 309 575 - -
Mibi02g3492 580 SUPERFAMILY Protein kinase-like (PK-like) 284 575 IPR011009 -
Mibi02g3492 580 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 379 580 - -
Mibi02g3492 580 ProSitePatterns Tyrosine protein kinases specific active-site signature. 424 436 IPR008266 GO:0004672|GO:0006468
Mibi02g3492 580 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 275 378 - -
Mibi02g3492 580 ProSiteProfiles Protein kinase domain profile. 303 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3492 Mibi-ChrMibi02 61308001 61312517 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3492 262 569 Trihelix Transcription Factor Family AT1G68690 50.000 6.33e-100 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mibi02g3492 PK_Tyr_Ser-Thr 5.3e-42 CL0016