Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3478 ATGTGTCAGGAAACAAAAATGGGTCTCCTTCCTTTTGGCTTTCTTCTTCTGGGATTTGTCTCCTCTGTTCTTGGATATGGATACGGAGGCTGGAATAATGCACATGCAACTTTCTATGGGGGTAGTGATGCTTCAGGAACTATGGGAGGGGCATGTGGGTATGGAAATCTGTACAGCCAAGGGTATGGAACAAACACAGCAGCTGTGAGCAGTGCTCTGTTTGACAATGGGCTTAACTGTGGTGCATGCTATCAGATTAGATGTGTGAATGACCCACAATGGTGTCTACCAGGAACTATTGTGGTCACTACCACTAATTTTTGCCCACCAGGTGGTTGGTGTGACCCTCCCAACCTCCATTTTGATCTTTCCCAACCTGTTTTCCAGCACATTGCTCAGTACAAAGCTGGCATTGTTCCTGTCAGCTACAGAAGGGTGAGATGTAGGAGAAGAGGAGGAATAAGATTTACCATCAATGGACATTCATACTTCAATTTAGTGCTAGTTACAAATGTTGGAGGAGCAGGAGATGTGCATGCATTGGCAATCAAAGGGTCAAGGACTAGATGGCAAGCCATGTCCAGAAACTGGGGCCAAAACTGGCAGAGCAATTCATACCTCAATGGTCAGGCCCTTTCCTTCTTGGTCACCACCAGTGATGGTCGATCTCTCGTCTCTTACAACGTTGCCCCGCCCTCTTGGTCCTTTGGACAGACCTATACCGGACGCCAATTTCGATACTGA 744 0.4704 MCQETKMGLLPFGFLLLGFVSSVLGYGYGGWNNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAAVSSALFDNGLNCGACYQIRCVNDPQWCLPGTIVVTTTNFCPPGGWCDPPNLHFDLSQPVFQHIAQYKAGIVPVSYRRVRCRRRGGIRFTINGHSYFNLVLVTNVGGAGDVHALAIKGSRTRWQAMSRNWGQNWQSNSYLNGQALSFLVTTSDGRSLVSYNVAPPSWSFGQTYTGRQFRY 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3478 247 PRINTS Expansin/Lol pI family signature 30 45 IPR007118 GO:0005576
Mibi02g3478 247 PRINTS Expansin/Lol pI family signature 136 152 IPR007118 GO:0005576
Mibi02g3478 247 PRINTS Expansin/Lol pI family signature 70 88 IPR007118 GO:0005576
Mibi02g3478 247 PRINTS Expansin/Lol pI family signature 190 204 IPR007118 GO:0005576
Mibi02g3478 247 PRINTS Expansin/Lol pI family signature 228 242 IPR007118 GO:0005576
Mibi02g3478 247 PRINTS Expansin/Lol pI family signature 48 66 IPR007118 GO:0005576
Mibi02g3478 247 SUPERFAMILY PHL pollen allergen 150 242 IPR036749 -
Mibi02g3478 247 Pfam Lytic transglycolase 66 143 IPR009009 -
Mibi02g3478 247 Pfam Expansin C-terminal domain 154 231 IPR007117 -
Mibi02g3478 247 Gene3D - 153 245 IPR036749 -
Mibi02g3478 247 SUPERFAMILY Barwin-like endoglucanases 30 171 IPR036908 -
Mibi02g3478 247 PRINTS Expansin signature 61 75 IPR002963 GO:0009664
Mibi02g3478 247 PRINTS Expansin signature 199 220 IPR002963 GO:0009664
Mibi02g3478 247 PRINTS Expansin signature 152 164 IPR002963 GO:0009664
Mibi02g3478 247 PRINTS Expansin signature 100 110 IPR002963 GO:0009664
Mibi02g3478 247 PRINTS Expansin signature 228 244 IPR002963 GO:0009664
Mibi02g3478 247 PRINTS Expansin signature 88 99 IPR002963 GO:0009664
Mibi02g3478 247 PRINTS Expansin signature 128 141 IPR002963 GO:0009664
Mibi02g3478 247 PRINTS Expansin signature 111 128 IPR002963 GO:0009664
Mibi02g3478 247 PRINTS Expansin signature 164 185 IPR002963 GO:0009664
Mibi02g3478 247 FunFam Expansin 153 245 - -
Mibi02g3478 247 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 163 242 IPR007117 -
Mibi02g3478 247 PANTHER EXPANSIN-A15 28 245 IPR002963 GO:0009664
Mibi02g3478 247 Gene3D - 22 149 IPR036908 -
Mibi02g3478 247 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 49 153 IPR007112 -
Mibi02g3478 247 SMART dpbb_1 66 143 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3478 Mibi-ChrMibi02 61192794 61194309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3478 6 246 Expansin Gene Family AT2G03090 76.800 1.46e-137 385