Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3475 ATGGAAATGGAACAGTACTCTTCCTTCCCTCATGATCATGATCTCCCTCCTGGCTTCAGATTCCACCCCACCGATGAAGAACTCATCACCCACTACCTCTCCCCCAAGCTCCTCCACCCATCCTTCTCTCCCCTCGCCATCGCCGTTGCCAATTTCAACAGCTCCGAGCCTTGGGATCTCCCCCGGAGGGCCAAAATGGGTGGTGGCAGAGGCAGAGAGTGGTACTTCTTCTGCCTGAGAGACAGGAAATACCCCACCGGCTGCCGCACCAACCGTGCCACCCCCTGCGGCTACTGGAAAGCCACCGGCAAGGACAAGCTCATCTTCAATAAGGCTAACAACACCCTCCTCATCGGCATGAAGAAGACCCTCGTTTTCTACACTGGCAGAGCCCCCAGAGGTGCCAAATCCAACTGGAATGAGTGGGTTCTCTGCAGAGTGTTCCTGAAGAGGGTAATTGCAGGAGGAGCTTCTCCTTCTTCTTCTTCTTCTTCTGAGTTGCCTCCATTAATGGATGCCTCCCCAAACCAAGCAGAGTTCGGGGAATCATCTCATTCTCATTCTCACGTGACCTGCTTCTCCGACCCCAACCACCCACAGGAAAATCTGATTATGACCCGGCACGACATAGCGGATAGCAGCCACCCAGTGGCCAATAATCATTCATCATCACATAATCCGTTCCCAAGTACCTTTCTGGGTCAAGATCAGCAGATGATGATGATGATGATGGGAAACAATGGATGGGGAGATTCTGATGGAGATATATCCTCTCTCATATATAACACCCATGACATGATTCACAGATCCCCTCACAATCAACAATACTACTCCCCACCTTCTGCTGGGCCCCTTGATGATATTGGTTGCTTATGGAATTACTCCACCTAG 891 0.514 MEMEQYSSFPHDHDLPPGFRFHPTDEELITHYLSPKLLHPSFSPLAIAVANFNSSEPWDLPRRAKMGGGRGREWYFFCLRDRKYPTGCRTNRATPCGYWKATGKDKLIFNKANNTLLIGMKKTLVFYTGRAPRGAKSNWNEWVLCRVFLKRVIAGGASPSSSSSSELPPLMDASPNQAEFGESSHSHSHVTCFSDPNHPQENLIMTRHDIADSSHPVANNHSSSHNPFPSTFLGQDQQMMMMMMGNNGWGDSDGDISSLIYNTHDMIHRSPHNQQYYSPPSAGPLDDIGCLWNYST 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3475 296 ProSiteProfiles NAC domain profile. 15 173 IPR003441 GO:0003677|GO:0006355
Mibi02g3475 296 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 214 - -
Mibi02g3475 296 SUPERFAMILY NAC domain 7 150 IPR036093 GO:0003677|GO:0006355
Mibi02g3475 296 Gene3D NAC domain 24 153 IPR036093 GO:0003677|GO:0006355
Mibi02g3475 296 MobiDBLite consensus disorder prediction 157 191 - -
Mibi02g3475 296 Pfam No apical meristem (NAM) protein 16 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3475 Mibi-ChrMibi02 61141094 61142235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3475 14 209 NAC Transcription Factor Family AT5G39610 52.444 8.60e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi02g3475 NAM 2.2e-30 No_clan