Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3474 ATGGGTCGATCACCATGCTGTGACAAGGTGGGCTTAAAGAAAGGACCGTGGACTCCCGAGGAAGATCAGAAACTCCTAGCTTATATTGAAGAACATGGCCATGGAAGCTGGAGAGCCTTGCCAGTAAAAGCTGGCCTACAGAGGTGTGGCAAGAGCTGCAGACTGAGGTGGACCAATTATCTTAGGCCTGATATTAAAAGAGGAAAGTTCAGTTTACAAGAAGAGCAAACCATCATCCAACTCCATGCTCTCCTAGGAAACAGGTGGTCGGCCATAGCCACGCATTTGCCAAAGAGAACAGATAATGAGATCAAGAACTACTGGAATACTCATCTGAGGAAAAGGTTAACCAAAATGGGGATTGACCCAGTGACCCACAAACCCAGGAATGATGCCCTTGTGGCTCGCGACGGCACCCAATCCAAGACTGCAGCCAACCTTAGCCACATGGCTCAATGGGAGAGTGCTAGGCTTGAAGCTGAAGCAAGATTGGCCAGAGAATCCAAACTACGTTCATCACTATCATTTACACCTTCATCTTCTGCTTCTGCCTCAGCTCATCCAGTTCTCAAGCCTTGGCATAATAATGATAATAACAATGTTACTAATGGTGGGTGGCTAAAATCCACTGGTCAAAGCATTAGCAGTGGTTGTGTTGGTGGTGATCTTGAATCTCCAAAGTCTACTCTAACTCTCTCTGAGAACACCCCACCTATTATGCCTATGATTGAGTTTGTGGGCACTTCAGGTTCTTGTGAGGCGGCAGAAATGGTGAAAGCAGAAGGTGATCAGAGAGAGTGGAATCATAGTAATGGTTTAGAGAATCCAATGTCATATGCGTCCAGCCTGCATCATGAGTTGACCATTTCCAACATGGAAGGCACGTGGACCTCTCAAGAGCCTCCTCTTAGGACTGGCACTGGTGGGGATGCTGTTGCTGAGGAACATGGATTCACCAATCTGTTGCTCAGTACAATCTCCGACGACCGGAGCTTGTCGGAGGAGGACGGCGGAGGAGGAGAGACCAACAATTGGGATGGTGGTGCTGGCAGAGGCGTCTTGTGTGAGGATAACAAGAACTACTGGAACAGCATTCTTAATTTGGTTAACACCAATTCGCCTTCTCATTCCCCCATGTTCTGA 1143 0.4777 MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPVKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLRKRLTKMGIDPVTHKPRNDALVARDGTQSKTAANLSHMAQWESARLEAEARLARESKLRSSLSFTPSSSASASAHPVLKPWHNNDNNNVTNGGWLKSTGQSISSGCVGGDLESPKSTLTLSENTPPIMPMIEFVGTSGSCEAAEMVKAEGDQREWNHSNGLENPMSYASSLHHELTISNMEGTWTSQEPPLRTGTGGDAVAEEHGFTNLLLSTISDDRSLSEEDGGGGETNNWDGGAGRGVLCEDNKNYWNSILNLVNTNSPSHSPMF 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3474 380 Gene3D - 13 66 - -
Mibi02g3474 380 SMART sant 66 114 IPR001005 -
Mibi02g3474 380 SMART sant 13 63 IPR001005 -
Mibi02g3474 380 MobiDBLite consensus disorder prediction 175 195 - -
Mibi02g3474 380 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi02g3474 380 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi02g3474 380 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mibi02g3474 380 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi02g3474 380 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi02g3474 380 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 243 - -
Mibi02g3474 380 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi02g3474 380 FunFam MYB transcription factor 69 116 - -
Mibi02g3474 380 CDD SANT 16 61 IPR001005 -
Mibi02g3474 380 FunFam MYB-related transcription factor 13 66 - -
Mibi02g3474 380 Gene3D - 69 116 - -
Mibi02g3474 380 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mibi02g3474 380 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3474 Mibi-ChrMibi02 61108661 61111648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3474 1 380 MYB Transcription Factor Family AT3G01140 55.263 1.67e-118 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi02g3474 Myb_DNA-binding 5.5e-15 CL0123