Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3469 ATGGGCAGGAAGAGAAAGAGCATGGTTAGTGTAGAAGAAGCAGGGGAGGAGATGGTGGCAGTGGGAGGTCTCCGGCGAACCCGGAAGCGATTCGTGGGGGTCCGGCAGCGACCTTCGGGGAGGTGGGTGGCGGAGATCAAAGACACCATACAGAAGATAAGGGTGTGGCTTGGCACTTTTGACACTGCTGAAGAAGCAGCCAGAGCCTATGATGAAGCTGCTTGCTTGCTTAGAGGGGCAAACACCAGAACCAACTTCTGGCCACCTTGTCAATCTCACTCCAATTCTCCCAACCCTGCTCTTTCTTCAAAGATCACAAATGTCCTTCTCCAAAGACTCCAAGCAAGAAACAATCAAAGCCATGACAACTCTTTTCCTCCCTCCTCTGCTTCTCCTCTGCTTCTCGGTCAGCAACAGAACCAAGAAGCAGAGTTCTCAATGGACCAGTTCACTGACGACTTTCTTAATGATCCCGAGGATTACACAACATCAGGCGACAACAGTGAGCAGTTTGATTACATCACTCGCAGTTTCGAGTCATGTTTGACTGAGAACAACGACGAGTGTGAGGAAAGAGAAGAGACGACTGGCAATTCAGGTGTGGAAAAGGAGGAAGAAAGCAGTATTGAGGGGATGCAGGATTTTGAGTTTCTGGACAGTGTGATGCCGACATCATGGAACAGCTATTCGCCATTCGAGATGGCCCGAGAAATGAAGGAAGAGGGAGAGAGCTATGGTGGGGATGAGCCTTGTATGCTGAGAGCGGCCATGAAGAGGATGAAGTATGAGAGGAAGTTCTCTGCTTCTCTCTATGCCTTCAATGGGATATCAGAATGCTTGAAGTTGAAACTCGGATCGTCAAACTTGAAGGGAAGAACAGTTTCTGAGCATCTATCTAATCTCCACATGGCATGTTCTACGAAGAACACAGTTGAGAATAAGGACATAAATAGTAAAGAAGAAGAAGAAAGACCACAAGCGTCAATTGATATTTCTGAGTCCCCTTCTTCTTCTTCTTCTTCTGATAATGACAGTGAATTAATTTGGAATTCACTGGATCTCACTCCAATTGCTTTGTTAACTAATTACTGA 1092 0.467 MGRKRKSMVSVEEAGEEMVAVGGLRRTRKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAACLLRGANTRTNFWPPCQSHSNSPNPALSSKITNVLLQRLQARNNQSHDNSFPPSSASPLLLGQQQNQEAEFSMDQFTDDFLNDPEDYTTSGDNSEQFDYITRSFESCLTENNDECEEREETTGNSGVEKEEESSIEGMQDFEFLDSVMPTSWNSYSPFEMAREMKEEGESYGGDEPCMLRAAMKRMKYERKFSASLYAFNGISECLKLKLGSSNLKGRTVSEHLSNLHMACSTKNTVENKDINSKEEEERPQASIDISESPSSSSSSDNDSELIWNSLDLTPIALLTNY 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3469 363 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 25 279 - -
Mibi02g3469 363 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Mibi02g3469 363 MobiDBLite consensus disorder prediction 329 345 - -
Mibi02g3469 363 SUPERFAMILY DNA-binding domain 30 87 IPR016177 GO:0003677
Mibi02g3469 363 MobiDBLite consensus disorder prediction 313 328 - -
Mibi02g3469 363 Gene3D AP2/ERF domain 29 87 IPR036955 GO:0003700|GO:0006355
Mibi02g3469 363 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Mibi02g3469 363 Pfam AP2 domain 30 79 IPR001471 GO:0003700|GO:0006355
Mibi02g3469 363 MobiDBLite consensus disorder prediction 192 209 - -
Mibi02g3469 363 FunFam ethylene-responsive transcription factor RAP2-11 29 88 - -
Mibi02g3469 363 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Mibi02g3469 363 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Mibi02g3469 363 CDD AP2 29 86 IPR001471 GO:0003700|GO:0006355
Mibi02g3469 363 MobiDBLite consensus disorder prediction 309 345 - -
Mibi02g3469 363 MobiDBLite consensus disorder prediction 184 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3469 Mibi-ChrMibi02 61036823 61037914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3469 28 109 AP2-EREBP Transcription Factor Family AT5G19790 70.732 4.81e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi02g3469 AP2 6.7e-15 CL0081