Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3466 ATGGAAAACACAGAACAAGTAAACTTTTCTGAATTCTTATCTGAGCTAATAGGTTTGGCTGATGAGGTTGCTTCCTCTGCTCTGAACTGTGGAATTGAAAAGAATGCTTTTGCTGAGTTTGCTGTGTTAGTTGAAGAATTTGCACCAATATTCAGTGATTTGAGAGACAAAAGCATGGTCATGGACAAGCCACCTATAAGAAAATCGTTGGAATCTCTTAAGAATGAGCTTAAGCGTTCTAAGGCTTTGACAAAAAACCTTAATCAGAAACAACTTGTTAAACATATTGAGGACATAACTCATGATCTCGGTCGATCATTGGGACTTTTGCTTGTGTCAAGCCTTGAAGTGTCCACTGATTCCAGAGAAAAGATTAGTGCATTGCTGAGAAAGTTGATGGGTGTAAGATTTGGTGGAAATATAAGTTCAACTTCAAGTCCAAGATCAGAGTTTGTCAGTGATGTGAAGCTTGAAGGGGAAATAGAAGAAGAAATAGTTGACTTCACTATTGATGATGTTATATTGCAACTGAAACATGGTAATGATGAAGAATTCACAGTTGCACTTCTGAGACTAAAGGAGTTCATGGCAGATGAAAAAGAAGATTATGATTTACTTAATCAGGAAGTGCTTGTTACCATTCTAATGAATCGACTAGGTTCAAGTAAGGCTGACAATAGGCTGACCGTCCTTCAATTACTAAGAAGCATTGCTATTGGCAATGATGAAAAGAAGGAGAAGATGGCAGATATAGAGTTTTTATCAAATGTGGTGAAGTCTCTTTCAAGGGAAGCAGAAGAAAGGAGAGAAGCAGTGGGGCTTTTACTGGACCTATCTAACCTTCCTTCAGTTAAGCGACGTGTAGGAAGAATTCAAGGGTGTATTGTTATGCTGGTCTCTATTCTTAATGGGGATGATCCTGTTGCTTCGCATGATTCAGCAAAATTGTTGGATATATTGTCTAGTAATTCTCAAAATGCTCTTCATATGGCTGAGGCCGGTTACTTTAAGCCACTAGTACAGTGTTTGAAGGAAGGGTCTGACATGACCAAGATTCTAATGGCAACAGCACTGTCAAGGTTGGAGCTCACTGATCACAGCAAATTTACACTTGGAGAAGATGGGGTGATTGAGCCTTTGGTAAACATGTTCACTTCTGGGAAACTTGAGTCCAAGTTATCAGCCCTAAATGCGCTGCAAAATTTGTCGAGCTTGACAGAAAATGCACAACGTTTGATCAGATCAGGGATTGTGGTATCTCTACTTCAACTTCTTTTCTCTGTAACATCTGTGCTCATGACTCTTCGGGAGCCAGTATCTGCTATTCTTGCAAGAATTGCTCAGTCAGAGCCCTTGCTTATCAATCCAGAAGCAGCTCAGCAGATGCTTTCACTTTTGAACCTTTCCAGCCCAATAATTCAAATTCATTTATTAGAAGCACTAGATAGCATTGCTGCTCATCCAGGCGCCTCAAAAGTGAGGGAAAAAATGAAGGAAAAAGGCGCACTTCAGCTTCTTTTACCTTTTCTGATGGAAACCAACACTAAAATCCAGAGCAAAGCCTTGAAATTTCTGTTCACTCTTTCCAAAGATTTAGCAGAAGAGTTGACAGAACATCTTGATGAAATCCATCTTTTTAATATTGTCAATATTATCTCATCATCAACTTCTGAGAGTGAAAAGGCTGTAGCTGTTGGTTTACTGAGTAATCTTCCTATTAGTGATAAGAAAGTGACAGATGTACTGAAGAGAGCGAATTTGCTCCCTATTTTAACATCCATTATGTCTTCAAGCACAGGAAGTAATTCACCCGCAACTAGTTTCTTAATGCAGAATGTTGTGGGTGTTATAATCCGGTTCACGAATCCATCTGACAAGAAACTACAACTTCTCTCAGCACAACACGGGGTAATTCCTTTGCTTGTAAAACTCCTCTCAACCGGCTCACCAATCACAAAATCCAAGGCTGCAACCTCACTTGCTCAATTATCCCAGAATTCTGTATCTCTTGGGAGGTCTAGAAAAGCTAGATGGTTTTGTGTTCCTCCCTCAGCAGATGCCCATTGTGAAGTTCACGACAGTAATTGCGTAGTGAAAAGCACATTTTGTTTAGCCAAAGCCGGTGCTGTTCCTCCGCTAATCCAAATATTAGAAGATAAAGAGAGGGAAGCTGTTGAAGCTGCTTTGACTGCCCTCTCAACTCTATTACAAAATGACATATGGGAAGGTGGTGTCAGCTGCATAGCTAAATCCTCAGGCGTTCAGGCTATTATAAAGATCTTAGAAGTTGGGGATGTAAAGATCCAAGAGAAAGCACTTTGGATGTTGGAGAGGATATTCAGAGTTGAAGAACTTAGAGTTAAATTTGGAGAATCCGCTCAGGTTGTTCTTATTGATCTTGCTCAGAAGAGTGATTCTAGAATGAAGTCAGCAGTTGCAAAAGTATTAGCTGAACTAGAGCTCTTGCAAGATCAATCAAGTTACTTCTAG 2490 0.3988 MENTEQVNFSEFLSELIGLADEVASSALNCGIEKNAFAEFAVLVEEFAPIFSDLRDKSMVMDKPPIRKSLESLKNELKRSKALTKNLNQKQLVKHIEDITHDLGRSLGLLLVSSLEVSTDSREKISALLRKLMGVRFGGNISSTSSPRSEFVSDVKLEGEIEEEIVDFTIDDVILQLKHGNDEEFTVALLRLKEFMADEKEDYDLLNQEVLVTILMNRLGSSKADNRLTVLQLLRSIAIGNDEKKEKMADIEFLSNVVKSLSREAEERREAVGLLLDLSNLPSVKRRVGRIQGCIVMLVSILNGDDPVASHDSAKLLDILSSNSQNALHMAEAGYFKPLVQCLKEGSDMTKILMATALSRLELTDHSKFTLGEDGVIEPLVNMFTSGKLESKLSALNALQNLSSLTENAQRLIRSGIVVSLLQLLFSVTSVLMTLREPVSAILARIAQSEPLLINPEAAQQMLSLLNLSSPIIQIHLLEALDSIAAHPGASKVREKMKEKGALQLLLPFLMETNTKIQSKALKFLFTLSKDLAEELTEHLDEIHLFNIVNIISSSTSESEKAVAVGLLSNLPISDKKVTDVLKRANLLPILTSIMSSSTGSNSPATSFLMQNVVGVIIRFTNPSDKKLQLLSAQHGVIPLLVKLLSTGSPITKSKAATSLAQLSQNSVSLGRSRKARWFCVPPSADAHCEVHDSNCVVKSTFCLAKAGAVPPLIQILEDKEREAVEAALTALSTLLQNDIWEGGVSCIAKSSGVQAIIKILEVGDVKIQEKALWMLERIFRVEELRVKFGESAQVVLIDLAQKSDSRMKSAVAKVLAELELLQDQSSYF 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3466 829 SUPERFAMILY ARM repeat 371 784 IPR016024 -
Mibi02g3466 829 Gene3D - 457 674 IPR011989 -
Mibi02g3466 829 Gene3D - 366 456 IPR011989 -
Mibi02g3466 829 Coils Coil 70 90 - -
Mibi02g3466 829 Pfam Armadillo/beta-catenin-like repeat 704 735 IPR000225 GO:0005515
Mibi02g3466 829 SMART arm_5 405 448 IPR000225 GO:0005515
Mibi02g3466 829 SMART arm_5 625 665 IPR000225 GO:0005515
Mibi02g3466 829 SMART arm_5 323 363 IPR000225 GO:0005515
Mibi02g3466 829 SMART arm_5 364 404 IPR000225 GO:0005515
Mibi02g3466 829 SMART arm_5 741 781 IPR000225 GO:0005515
Mibi02g3466 829 SMART arm_5 490 530 IPR000225 GO:0005515
Mibi02g3466 829 SMART arm_5 696 737 IPR000225 GO:0005515
Mibi02g3466 829 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 375 417 IPR000225 GO:0005515
Mibi02g3466 829 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 708 735 IPR000225 GO:0005515
Mibi02g3466 829 Gene3D - 688 827 IPR011989 -
Mibi02g3466 829 Coils Coil 244 271 - -
Mibi02g3466 829 Gene3D - 166 365 IPR011989 -
Mibi02g3466 829 SUPERFAMILY ARM repeat 163 487 IPR016024 -
Mibi02g3466 829 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 171 829 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3466 Mibi-ChrMibi02 61005931 61008862 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3466 180 829 U-box Gene Family AT1G20780 28.530 5.33e-47 178