Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3464 ATGGGTTGCATTAACTCTAAGAAGTCCTTTTCCAGATATTCACCTCAATATGTTCGTTCGGCTTCCACGGATAAGAGGTCGTCTGTGGTGGAGCCACCGTCCAGAGTCCATTCTGGGGTTCTGAATTATGAGACCAAAGTGGAGCAGCAACAATCGGAGGATCGGATTCAGGATGAGAAGAGATTCTTTAAGAAGAACAGTTCTAGAAGATCTGGTTCTTTGAGAATTTCGCAGAGATTCGTGGAAGCTGAGCAGAATGCAGCTGGATGGCCTTCTTGGCTCACCTCTGTTGCAGGGGAAGCTATCCAAGGTTGGGTGCCTCTTAAGGCAGATTCATTTGAGAAATCAGACAAGATTGGACAGGGTACATATAGCAGTGTGTTCCGGGCACGGCAGGTTGAAACTGGGAGGATGGTTGCCCTGAAGAAGGTACATATTGAGAACTTTCATCCTGAGAGTATTAGGTTCATGGCAAGAGAAATAGCAATCCTTCGTAGGCTTGACCACCCAAACATCATGAAATTGGAGGGTATAATTACATCACGACTATCAAGTAGCATATACCTTGTATTTGAATACATGGAACATGATCTTGCAGGCCTAGTATCCTCTCCGTACATCAGATTCAGTGAGACTCAGGTTAAATGTTACATGAGGCAATTATTAAGTGGACTTGAACACTGCCACATGCATGGCGTTATGCACCGTGACATCAAATCATCAAATATATTGGTAAATAATGAGGGTGTTCTGAAGATAGGAGATTTTGGATTAGCAAATACCCTCAACAACAATCATCCCTTGACCAGCTGTGTGGTGACTCTATGGTATCGTCCTCCTGAACTTTTGATGGGATCAACAAACTATGGTGTATCAGTGGATCTATGGAGTGCGGGCTGTGTATTTGCAGAATTTTTTCTGGGGAAGCCTCTTCTTAAGGGGAGAACTGAAGTCGAACAATTACACAAAATATTTAAACTTTGTGGCTCTCCACCTGATGAATTTTGGAAAAAGTCTAAGCTTCCTCTTGCAACAATGTTTAGACCTCAGACTTATTATGAATGCTCTCTGACGGAGCACTGTAAGGACTTTCCAGTTTCAGCTGTAAACTTAATTGAGACTTTACTTTCCATTGACCCTAATGAACGTGGGACTGCCTCCTCTGCCCTAATGTCTGAGTATTTCAGCACCAAGCCATATGCTTGTGATCCATCACTTCTGCCAAAGTATCCACCCCACAAAGAAATGGATGTCAGGAATTGGGAAGAAGAACATAGGAGAAAAGCTGGAGATAAAGTGCAAGAGGCTGCAAAACCAAGGAAACAAAAGCGAAGCCATAAAATTTTGCAAGAACCAACTGATATCAATAATTCAGCTCCGAAAAGAGAGGAAGTGAAGAACATCTCTCAAAGTGCTCGTAGAGACAATGGAAGAATGCATCTCCCTAAGGAAAAAGGAGGAGCTATGCATAGAGGGGCATTGAAGCCATCATCAAATGCAACTTCCGCTACTACACGTGTATTAATGGATGCATCTCATGGCTTTAGTGTACAAGTGGCAGTCTCAGGATCCAATGGCTTTACATGGACCAAAGCCAGAAAGGGAGATGCTACATCTACTTTGTCGGATGGCTCAAAAAGCAAAATCAGTGCCCTTGATCCATCCTTTGCAAAAGGCACCTACGATCTAACCAAACGAGCAGGGAAAAATGTATCAGAAAGAAAATATATTGGTAATGCAAGCCATCATGGCAAGACTTTCAACCATTACCGACAACAAATGCATCAGGTCCCACGTGGCACAGCAGACGCTATTAATGAGGCTGATGAATACAATTATATAGATGTTCGTCCGTCAGAATTAACACATGTGATAAATACTCAGAGCCACAGAAAGCGAGGTCATCTCCTTGAATTAGCAGGACCACAAGTATCTCGGCCAAATAGAACTATCGAGTCACTTCTGAGGAATGAAAACGGTATTCCTCGATCAACTCGCAAATCAAGACTAGGAAGAGGTAATGACTCTTTGTTCAGTGTGTAG 2043 0.4293 MGCINSKKSFSRYSPQYVRSASTDKRSSVVEPPSRVHSGVLNYETKVEQQQSEDRIQDEKRFFKKNSSRRSGSLRISQRFVEAEQNAAGWPSWLTSVAGEAIQGWVPLKADSFEKSDKIGQGTYSSVFRARQVETGRMVALKKVHIENFHPESIRFMAREIAILRRLDHPNIMKLEGIITSRLSSSIYLVFEYMEHDLAGLVSSPYIRFSETQVKCYMRQLLSGLEHCHMHGVMHRDIKSSNILVNNEGVLKIGDFGLANTLNNNHPLTSCVVTLWYRPPELLMGSTNYGVSVDLWSAGCVFAEFFLGKPLLKGRTEVEQLHKIFKLCGSPPDEFWKKSKLPLATMFRPQTYYECSLTEHCKDFPVSAVNLIETLLSIDPNERGTASSALMSEYFSTKPYACDPSLLPKYPPHKEMDVRNWEEEHRRKAGDKVQEAAKPRKQKRSHKILQEPTDINNSAPKREEVKNISQSARRDNGRMHLPKEKGGAMHRGALKPSSNATSATTRVLMDASHGFSVQVAVSGSNGFTWTKARKGDATSTLSDGSKSKISALDPSFAKGTYDLTKRAGKNVSERKYIGNASHHGKTFNHYRQQMHQVPRGTADAINEADEYNYIDVRPSELTHVINTQSHRKRGHLLELAGPQVSRPNRTIESLLRNENGIPRSTRKSRLGRGNDSLFSV 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3464 680 MobiDBLite consensus disorder prediction 1 35 - -
Mibi02g3464 680 SUPERFAMILY Protein kinase-like (PK-like) 107 401 IPR011009 -
Mibi02g3464 680 PANTHER CELL DIVISION PROTEIN KINASE 111 399 - -
Mibi02g3464 680 Pfam Protein kinase domain 113 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g3464 680 MobiDBLite consensus disorder prediction 457 490 - -
Mibi02g3464 680 CDD STKc_CDK9_like 113 395 - -
Mibi02g3464 680 MobiDBLite consensus disorder prediction 421 498 - -
Mibi02g3464 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Mibi02g3464 680 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Mibi02g3464 680 FunFam probable serine/threonine-protein kinase At1g54610 100 195 - -
Mibi02g3464 680 FunFam probable serine/threonine-protein kinase At1g54610 196 435 - -
Mibi02g3464 680 MobiDBLite consensus disorder prediction 656 680 - -
Mibi02g3464 680 ProSiteProfiles Protein kinase domain profile. 113 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g3464 680 MobiDBLite consensus disorder prediction 1 29 - -
Mibi02g3464 680 MobiDBLite consensus disorder prediction 421 438 - -
Mibi02g3464 680 Gene3D Transferase(Phosphotransferase) domain 1 196 435 - -
Mibi02g3464 680 SMART serkin_6 113 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g3464 680 Gene3D Phosphorylase Kinase; domain 1 100 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3464 Mibi-ChrMibi02 60990474 60994543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3464 105 450 Core Cell Cycle Gene Families AT5G10270 44.505 4.69e-102 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mibi02g3464 Pkinase 2.3e-70 CL0016