Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3454 ATGAAAAAAGTCACTGGCTACATCTTTGGCACCATTTGGTGGGGATTTGGCCTCAACCTCATAGCTTACTTAATTGCTTCACATGTTACTGGAGGGTGCTGGTATATCCTGGGAATTCAACGTATTGCATCATGCATCCAGAAGCAGTGTGAAAGTAATCCTGGTTGTAATCTGTTGCGAAACAACGCAGCACTGGAAAATCTATGTGGGGGAAATTCCACAGTAGTGTTGAGAAAGAGTTTGTGCTTAGATTATGAAGGACCTTTCAAGTATGGGATCTACCAGTGGGCTGTTCCAGTCATATCCAGTAATTCCTTGGCTGTCAAGATTCTATATCCCATATTCTGGGGATTGATGACTCTCAGCACATTTGGCAACGTTCTTGAACCCACAAGTCAATGGCTGGAAGTAATATTCAGCATAAGCATTGTGCTTAGTGGATTACTTCTTTTCACTTTGTTGATTGGGAATATCCAGGTATTCCTACTAGCAGTAATGGGAAAGAAGAGAAAGATGCAGCTGAGATGTCGAGACATGGAGTGGTGGATGAGGAGGAGGCAGCTGCCATCGCACTTAAGACGAAGAGTTCGCCATTTTGAGCGTCACAGATGGGCAGCTTTGGGGGGAGAGGATGAAATGGAATTGATTAAGGACTTGCCTGAAGGCCTGAGGAGGGACATCAAGCGCTTTCTTTGCTTAGACCTCATAAAAAAGGTGCCTCTGTTTCACAACTTGGATGATCTTATTCTAGATAACATCTGTGACAGGGTCAAGCCCTTAATCTTTTCCAAAGATGAAAAGATAACCAGAGAAGGAGACCCAGTGAGAAGGATGGTATTCATCGTTCGAGGACGAATAAAACGCATCCAAAGGCTAAGCAGAGGCATGGTAGCCACAAGTAACCTTGAAGCAGGAGGTTTTCTGGGTGATGAGCTGCTTTCATGGTGCCTTCGCAGGCCTTTCATAGACCGGCTTCCATCGTCCTCAGCGACATTTGTATGTGTTGAATCAACAGAAGCCTTTGGCCTGAGTGATGAACACCTTAAGTACATTACTGATCACTTCCGCTACAAATTTGCTAATGAAAGACTTAAGAGAACAGCCAGGTATTACTCATCCAATTGGAGAACTTGGGCTGCTGTTAACATCCAACTTGCTTGGCAAAATCACAGGAAAAGGAGAAAAGGTTCAGTTATTTCTGTAAGTGATCAAAATGGAGGAGCCACTGAACGCAGGCTTCTCCAATATGCTGCAATGTTTATGTCAATAAGGCCACATGACCATCTTGAATAA 1293 0.4385 MKKVTGYIFGTIWWGFGLNLIAYLIASHVTGGCWYILGIQRIASCIQKQCESNPGCNLLRNNAALENLCGGNSTVVLRKSLCLDYEGPFKYGIYQWAVPVISSNSLAVKILYPIFWGLMTLSTFGNVLEPTSQWLEVIFSISIVLSGLLLFTLLIGNIQVFLLAVMGKKRKMQLRCRDMEWWMRRRQLPSHLRRRVRHFERHRWAALGGEDEMELIKDLPEGLRRDIKRFLCLDLIKKVPLFHNLDDLILDNICDRVKPLIFSKDEKITREGDPVRRMVFIVRGRIKRIQRLSRGMVATSNLEAGGFLGDELLSWCLRRPFIDRLPSSSATFVCVESTEAFGLSDEHLKYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQLAWQNHRKRRKGSVISVSDQNGGATERRLLQYAAMFMSIRPHDHLE 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3454 430 Gene3D Jelly Rolls 239 357 IPR014710 -
Mibi02g3454 430 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Mibi02g3454 430 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 398 - -
Mibi02g3454 430 Pfam Ion transport protein 9 159 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mibi02g3454 430 Gene3D Helix hairpin bin 167 232 - -
Mibi02g3454 430 SUPERFAMILY cAMP-binding domain-like 168 355 IPR018490 -
Mibi02g3454 430 ProSiteProfiles cAMP/cGMP binding motif profile. 241 320 IPR000595 -
Mibi02g3454 430 CDD CAP_ED 241 351 IPR000595 -
Mibi02g3454 430 SUPERFAMILY Voltage-gated potassium channels 9 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3454 Mibi-ChrMibi02 60903325 60905919 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3454 1 430 Ion Channels AT5G15410 73.836 0.0 651