Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3439 ATGATGTCTCGTCTGTTGTCTTCTCTTGCGTCTGAGTATTTCCATTTCTCTTCTCCTCTGTTCAGGTGCTTTGGAGGCTCTGCTTCAACTTCTAGCCGGAAACAACCTTCTTCTGCGTCAATAGAAGATCTATGCCGTCGCTTTTCTCTTTCCCAACTCCGAAAATTAACCCATAACTTTGACACAAGCCGGATTATCGGTGAAGGGTCCCATGATATTGTATACAGAGCTTCCATGATCTCCATCAATGGCCAACTCAAGCATATTGCAGTGAAGCGCTTCCGACAAGAATTAGCCAGTACCCCAGAAGGGCTTTCACTATACAAGAATGACATCATATTGTTGTGTCAGCTTCACCATCCCAATCTGTCACCTCTTGTTGGATTTTGTGATGATCATAATGAATTGATTGTTGTTTATGACTATACCCCAAAAGGAACACTCTTTCATCAACTTTACAACACGTCACCACCAACACTTCTCTCTTGGAACAAGAGGCTAGAAATCAGTATAGGGCTGGCGCGTGGATTACACTACCTTCATTCTGGAACCAAACGCACCATCATTCATCTCAATACAGCCCCGGTGAACATTCTCTTGGATGAGAATTGGGTTCCTCAATTAACATTTTTCGGTCTCTCTTTGAAAGGACCGAAGTTTTCAGCTAAGGTTCCGAAGCCTATAGAGGTGGAACGCCCTGTTGGTACTGTGGGATACATAGCCCCTGAGAGTGTTTTGTGTGCCCCTAAAGTGACACATAAAAGTGATGTCTATTCTTTTGGGGTAGTTTTGGTAGAACTAATTTGTGGAAACACTTCGTTGCAAATTATTAGGCAGCTCGGGGTGCGTGATTTGGCAGGAATAATAGGAAATGGTGAGGGGATTATTGATCAGAGTTTGGTGGGACAAGTAGCCGGAAAGTGTTTGAAGTTGTATATGGCCATTGCTGAGAGTTGCTTGTGTGAGGATCCTAATAAGAGGCCTGACATGGGAGATGATGCTTGGACAGACTCAGTGAAGGTGCGAATCGAGAAGAAGAAGGTCACTCTGTCCAGCATTCTAGACCAACGCAAAGATATCAAGCCGAGCTTCTTGGAAGATATCTACTATGACAGGGTGGTTCGTCTAGTTAAGGAAGTCCAGGTCTCCTACTTGATGAGGAGATTGAATTGA 1173 0.4408 MMSRLLSSLASEYFHFSSPLFRCFGGSASTSSRKQPSSASIEDLCRRFSLSQLRKLTHNFDTSRIIGEGSHDIVYRASMISINGQLKHIAVKRFRQELASTPEGLSLYKNDIILLCQLHHPNLSPLVGFCDDHNELIVVYDYTPKGTLFHQLYNTSPPTLLSWNKRLEISIGLARGLHYLHSGTKRTIIHLNTAPVNILLDENWVPQLTFFGLSLKGPKFSAKVPKPIEVERPVGTVGYIAPESVLCAPKVTHKSDVYSFGVVLVELICGNTSLQIIRQLGVRDLAGIIGNGEGIIDQSLVGQVAGKCLKLYMAIAESCLCEDPNKRPDMGDDAWTDSVKVRIEKKKVTLSSILDQRKDIKPSFLEDIYYDRVVRLVKEVQVSYLMRRLN 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3439 390 Gene3D Transferase(Phosphotransferase) domain 1 144 332 - -
Mibi02g3439 390 SUPERFAMILY Protein kinase-like (PK-like) 33 331 IPR011009 -
Mibi02g3439 390 PANTHER OS07G0166700 PROTEIN 44 332 IPR045272 GO:0004714|GO:0006468
Mibi02g3439 390 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 333 390 IPR037039 GO:0004106|GO:0009073
Mibi02g3439 390 ProSiteProfiles Protein kinase domain profile. 60 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g3439 390 Pfam Protein tyrosine and serine/threonine kinase 63 330 IPR001245 GO:0004672|GO:0006468
Mibi02g3439 390 Gene3D Phosphorylase Kinase; domain 1 25 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3439 Mibi-ChrMibi02 60741740 60746507 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3439 25 345 Receptor kinase-like Gene Family AT3G51550 36.890 1.41e-60 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mibi02g3439 PK_Tyr_Ser-Thr 2.9e-29 CL0016