Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3430 ATGGGAATCCTTCAAAAGTGCTTTGGAGGAGGAGGCTCTTCAGCATCATCTTCTTCTCCGAAACAACCTTATTATTCCACATCAATAGAACATCTATGCCATTGCTTTTCTCTTTCCCAACTCCGAAAATTAACCCATAACTTTGACACAAGCCGGATTATCGGTGAAGGGTCCTATGGTATTGTGTACAGAGCTTCCATGATCTCCATCAATGGCCAACTAAAGCATATTGCAGTGAAGCGCTTACGACAAGAATTAGCCAGTTCCCCAGAAGGGCTTTCACTATTCAAGAATGAAATCATATTGTTGTGTCAGCTTCACCACCCCAATCTGTCACCTCTTGTTGGATTTTGCGATGATCATAATGAATTGATTGCTGTTTATGACTATACCCCAAAAGGAACACTCTTTCATCAACTTTACAACACGTCACCACCAACACTTCTCTCTTGGAACAAGAGGCTAGAAATCAGTATAGGGCTGGCGCGTGGATTACACTACCTTCATTCTGGAACCAAACGCACCATCATTCATCTCAATACAGCCCCGGTGAACATTCTTTTGGATGAGAATTGGGTTCCTCAATTAACATTTTTCGGTCTCTCTCTGAAAGGACCAAAGTTTTCAGCTAAGGTTCCGAAGCCTATAGAGGTGGAACGCCCTGTTGGTACTGTGGGATACATAGCCCCTGAGAGCTTTTTGTTTGCCCCTAAAGTGACACATAAAAGTGATGTCTACTCTTTTGGGGTAGTTTTGGTAGAACTAATTTGTCGAAACACTTCGTTGCAAATTATTAGTCAGCTTGGAGTGCGTGATTTGGCAGGAATAATAGGACATGGTGAGGGGATTATTGATCAGAGTTTGGTGGGACAAGTAGCAGGAAAGTGTTTGAAGTTGTATATGGACATTGCTGAGAGTTGCTTGTGTGAGGATCCTAATAAGAGGCCTGATATGGGAGATGTTGAAGTCCAACTTGAACATGTTTTGCAACTTCAAGAGGAAGCAGATGCCAACCATTGA 1020 0.4255 MGILQKCFGGGGSSASSSSPKQPYYSTSIEHLCHCFSLSQLRKLTHNFDTSRIIGEGSYGIVYRASMISINGQLKHIAVKRLRQELASSPEGLSLFKNEIILLCQLHHPNLSPLVGFCDDHNELIAVYDYTPKGTLFHQLYNTSPPTLLSWNKRLEISIGLARGLHYLHSGTKRTIIHLNTAPVNILLDENWVPQLTFFGLSLKGPKFSAKVPKPIEVERPVGTVGYIAPESFLFAPKVTHKSDVYSFGVVLVELICRNTSLQIISQLGVRDLAGIIGHGEGIIDQSLVGQVAGKCLKLYMDIAESCLCEDPNKRPDMGDVEVQLEHVLQLQEEADANH 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3430 339 PANTHER OS07G0166700 PROTEIN 33 332 IPR045272 GO:0004714|GO:0006468
Mibi02g3430 339 Gene3D Transferase(Phosphotransferase) domain 1 132 339 - -
Mibi02g3430 339 PIRSF ILK 37 337 - -
Mibi02g3430 339 Pfam Protein tyrosine and serine/threonine kinase 51 324 IPR001245 GO:0004672|GO:0006468
Mibi02g3430 339 ProSitePatterns Protein kinases ATP-binding region signature. 54 80 IPR017441 GO:0005524
Mibi02g3430 339 SUPERFAMILY Protein kinase-like (PK-like) 21 325 IPR011009 -
Mibi02g3430 339 Gene3D Phosphorylase Kinase; domain 1 12 130 - -
Mibi02g3430 339 ProSiteProfiles Protein kinase domain profile. 48 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3430 Mibi-ChrMibi02 60676026 60677045 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3430 8 338 Receptor kinase-like Gene Family AT3G51550 39.528 7.53e-68 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mibi02g3430 PK_Tyr_Ser-Thr 5.6e-33 CL0016