Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3415 ATGCTTCTCTCCTCCGGCCGTGTCTTCGTCTGCAAGACATGCAACCGCCAGTTCTCGTCCTTTCAAGCCCTCGGCGGCCACCGTGCCAGCCACAAGAAGCCCCGGATTATGTCCGGATCATCATCGGCCCATGACGACAACAGCACCAACACAGACCATCTTCTTCTTCATGCTTCTTCACCGTCTCCACCTGCAAAGCCTAAAAGTCATGAGTGTTCAATATGTGGATTGGAGTTTGCCATTGGTCAGGCTTTGGGTGGTCACATGAGAAGACACAGAGCAACAACAACAACAACATCTCATAGTCATAGTAAGAACTCTTCGTCTTCACCACCATCAAGTGTGTTAGATCATTTTGATTCAGAGAATACAGAAAATATGAAGAATAAGAAGAGCAAGAGGGTTTTGTTTCTGGACTTGAACTTGACGCCACTTGAGAATGATTTGGAGATTTTAGGGATCACAACCTCAACTACTCCTTTGCTAGTTACACTTTAG 498 0.4618 MLLSSGRVFVCKTCNRQFSSFQALGGHRASHKKPRIMSGSSSAHDDNSTNTDHLLLHASSPSPPAKPKSHECSICGLEFAIGQALGGHMRRHRATTTTTSHSHSKNSSSSPPSSVLDHFDSENTENMKNKKSKRVLFLDLNLTPLENDLEILGITTSTTPLLVTL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3415 165 Gene3D Classic Zinc Finger 6 92 - -
Mibi02g3415 165 ProSiteProfiles Zinc finger C2H2 type domain profile. 70 97 IPR013087 -
Mibi02g3415 165 PANTHER ZINC FINGER PROTEIN ZAT5 6 147 - -
Mibi02g3415 165 MobiDBLite consensus disorder prediction 23 70 - -
Mibi02g3415 165 ProSiteProfiles Zinc finger C2H2 type domain profile. 9 36 IPR013087 -
Mibi02g3415 165 MobiDBLite consensus disorder prediction 86 120 - -
Mibi02g3415 165 SUPERFAMILY beta-beta-alpha zinc fingers 7 92 IPR036236 -
Mibi02g3415 165 ProSitePatterns Zinc finger C2H2 type domain signature. 11 31 IPR013087 -
Mibi02g3415 165 MobiDBLite consensus disorder prediction 99 120 - -
Mibi02g3415 165 MobiDBLite consensus disorder prediction 35 57 - -
Mibi02g3415 165 ProSitePatterns Zinc finger C2H2 type domain signature. 72 92 IPR013087 -
Mibi02g3415 165 Pfam C2H2-type zinc finger 70 94 - -
Mibi02g3415 165 Pfam C2H2-type zinc finger 8 34 - -
Mibi02g3415 165 SMART c2h2final6 9 31 IPR013087 -
Mibi02g3415 165 SMART c2h2final6 70 92 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3415 Mibi-ChrMibi02 60568790 60569287 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3415 9 155 C2H2 Transcription Factor Family AT2G37430 47.651 2.47e-32 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi02g3415 zf-C2H2_6 1e-09 CL0361