Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3401 ATGAGATTAGGGCTTTTCATTTCGGAAGAAGGAGCCGTCAAGTTCTGCAGCAAAGCTCGGCGACACTTATACAGAGCCATGGCGAGGATCAAGGTTCACGAGCTCAGGCAGAAAACGAAGGCCGATTTGCTGACCCAGCTCAAGGATCTCAAAGCTGAACTTGCTTTGCTCCGTGTCGCTAAAGTCACTGGTGGTGCTCCCAACAAGCTCTCCAAGATAAAGGTGGTGAGGTTGTCCATTGCCCAAGTGTTGACTGTGATTTCTCAGAAGCAGAAGGCTGCATTGAGGGAAGCCTATAAGAACAAGAAGTACTTGCCTCTTGATCTGCGCCCAAAGAAGACCAGGGCTATTCGCAGACGGCTTACTAAGCACCAGGCTTCACTGAAGACTGAACGACAGAAGAAAAAGGAGACATACTTTCCCTTGAGGAAATATGCCATTAAGGTGTAG 450 0.4867 MRLGLFISEEGAVKFCSKARRHLYRAMARIKVHELRQKTKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKETYFPLRKYAIKV 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3401 149 Hamap 50S ribosomal protein L29 [rpmC]. 30 90 IPR001854 GO:0003735|GO:0005840|GO:0006412
Mibi02g3401 149 PANTHER 60S RIBOSOMAL PROTEIN L35 27 149 IPR045059 GO:0000463|GO:0022625
Mibi02g3401 149 SUPERFAMILY Ribosomal protein L29 (L29p) 30 91 IPR036049 GO:0003735|GO:0005840|GO:0006412
Mibi02g3401 149 CDD Ribosomal_L29_HIP 34 90 - -
Mibi02g3401 149 Pfam Ribosomal L29 protein 34 90 IPR001854 GO:0003735|GO:0005840|GO:0006412
Mibi02g3401 149 Coils Coil 40 60 - -
Mibi02g3401 149 FunFam 60S ribosomal protein L35 27 103 - -
Mibi02g3401 149 Gene3D - 104 149 - -
Mibi02g3401 149 Gene3D - 27 103 IPR036049 GO:0003735|GO:0005840|GO:0006412
Mibi02g3401 149 TIGRFAM L29: ribosomal protein uL29 34 90 IPR001854 GO:0003735|GO:0005840|GO:0006412
Mibi02g3401 149 FunFam 60S ribosomal protein L35 104 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3401 Mibi-ChrMibi02 60398164 60401936 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3401 27 149 Cytoplasmic Ribosomal Protein Gene Family AT2G39390 90.244 7.21e-74 215