Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3399 ATGGGGGTCGAAAACTACCATGTAATTGAGCTCGTCGGAGAAGGTTCGTTTGGGAAAGTGTATAAAGGAAGGAGGAAGCATACCGGACAGACTGTTGCAATGAAATTCATAATGAAGCATGGCAAAAGTGAGAAAGACATCCATAATTTAAGACAAGAAATTGAGATCTTAAGAAAGTTGAAGCATGAAAATATTATCCAAATGCTTGATTCCTTTGAAAGCCCACAAGAGTTTTGTGTTGTCACAGAATTTGCACAAGGAGAACTATTTGAGATTCTTGAGGATGATAAATGCCTTCCTGAAGAACAAGTTCAAGCAATTGCAAAGCAATTGGTGAAAGCATTATATTACTTGCACTCTAATCGCATCATCCATCGGGACATGAAGCCACAGAATATTCTTATTGGTGCCGGATCTGTTGTCAAGCTTTGTGATTTTGGGTTTGCACGTGCAATGTCAATGAATACTGTTGTTTTGCGATCCATAAAAGGCACTCCATTGTACATGGCTCCAGAACTTGTACGGGAACAACCTTACAACCACACTGTTGATTTGTGGTCTCTTGGTGTTATATTGTATGAGTTATTCGTTGGCCAACCTCCTTTTTATACAAATTCTGTATATGCTCTCATCAGACATATTGTTAAGGACCCAGTTAAATATCCAGACACCATGAGCCCCCAGTTCAAAAGCTTTTTGAAGGGTTTGCTAAACAAGGCACCAGAAAGTCGACTGACTTGGCCAGCCCTTCTTGAGCATCCATTTGTAAAGGAAGCTTCAGATGAATTAGAAACCAAGGAAATGAGTGAAACGTCTGTTTCACCTAAGGGTTGTGATCCAACTCGGAGGGGTGAAGAAAAAACCTATCAACCTTCATCAGGTTCAGCTTCTTCAAGTTTCAGTGCTGCGACTATAGTACTATCTTTGTCATGTCTCTTTCTGATCCTAATTCACATAATCATAGTCTCAATACAAATAATTTTCATTACAGCTTTTGAGGAGAATACTACTTTTCCTTCCCAAAGTGAAGCTCAGATAAACTGTCCTGACAAGGAGACAGCTCATTCTACAGTAAATGATCCGTCCCCAGGATTTTCAAATCAAAATTCTGTCGGAGAAACAGGCTGCCAGAGATTGGAGAAGCTAGAAAATATCTCTCGTACTGTCAAAGGTGCAAAATTAATTGGTCAGGATAATGAAGCATTGGCTTATATTCTGTTACACTTGAAGACATGGTCTGAAGGATCTCGTAACAAGTGCAGTGATCAAGGAATTGTTGATACAAACCGATCATTGATAATTCTCTCAAACCTAGTTGCAGCAGAAGCCCTCAATTCTGGCGGACAAATAGATGAATTAATAACTGAGCTTCTTGCATTTAGTGGAGCTGTTATAAGAGTTAAAACCTCTGAAGTTAACGTCATGGTAGAAAAGAGTTTCTCCATCACTAAAATGTTATTAGATAACAATGGAAGCTTCAATGCAATCTCTTATTGGGGACATTGGGTTGCGATTGTGGAAATTTATTCGCAGGTTGTAGCCTCCACAAATGATGCATATGGAAGGGTTCTCTGTGAGGCCGGTGCATGTATTACAATCATGCTGTCTGGAGTTGCCCAAGCTGTTAAATCATCTTCTCAAACTTCAGGCCCAGAGATGTTGAATGAGACGATTAAAAAAATTCTGGATCATGCTATAACCACTGGTTTAGTGGACCATTTGTGTCTTTGCTTAAAAACTTCAGGTTCTTCAGGTTCTTCTGTTATGTTACGGGCGGCTTCAGAAGCATGTAGAGCTATCTGGTCTCTGATAAATGCACTGGACATTCTTTTCTTAAAAACAAATGCCATTGTATTTCCTATAGATTCTTTACAGAGCCATTCATTGTCTCGACTAGAAATTATAGATCATGAGCAAAGTCCATTTATAGGGTCAGAGTCATCAAAAATTGTCGAAGCAGTGGCAAGAGCATTTCTGAATACCAAAGCCATTCGGGTTGCTTTTTACTATTGTTTCCACCAATGCCTTGAGGCTGCAATGTGTTCTGGACTTCAGCTTTTGTCAAGATGCTGCCTACACAGTGGAGTTGTTCCATCTCTCCTTTGTGGTCTGCCTAGCTCCCTTCCTGTGGCTACTGTTGTTAGTGGCGGTGGAGATGGTACAATTGTTTCGGAAATATTTTCTGTATTGTCAATATGCACCGCCTCTTTAAATAAAGATCCACAAAGTGGAGATTCAAATAAGAGGTGCAAATTCACCAATCCTTCTGCTCTGATTCTTTCTTCATGCCTCACCCTTGCTGCGATTGCGCAATGTTTGAAGTCATCTGGAAGAAATTCAGCGCTGTTTATGCTCACAAACTCACCAAAGAAACAGCTCGCCCGACTTTCATTGCTTGCCCATCATATTTCTTCTGATGATAGAGAGAAAACTTATTTTCAACCCCAAAGTGCATCAGCCATGCTGGCTTTAGCATCAATTCTATCCCTCGAATCAGGGGCTGCTATTGAGTCCTCAATATCAGAAATTGCCATGCCTTTGATTCCTCGAACGTCTTCACTATATGATAATCTTAAAGTTTCCTCTGGCAATAAAAATGAATTGGATCTTTCCTACCCCAGTGGGAAGCTCTCATATTGGCAAGGACTGAGAGATGGCTGTGTTGGCCTTTTAGATTCCAGACTGAAGTGGGGAGGACCATTAGCTGTTCAACAGTTGTGTGCTATTGGTGTCCCTCTTTCGCTTATTGGCTTATTAGGCATTGATGGCAGCAATGCTTCTCATGGACCTGAGTGCTCATATGATACAGTTGGATTATCCCCTGCAGGTGTTATATGGACAATTTCATCTATATGTCAATGCCTCTCTGGTGGTGCTTCTACTTTTCGTCAGATATTGATTAAGAATGAACATATCAAGCTGTTTTCTGACTTGATATGTGATGCTCATCTGAAGTTGATAAACAGATGGATCGGACCTGGTGGAGGGAGAGCCGGAGTTAGAGATATAATTAATGCAGTAATAGATCTCTTGGCATTTCCATTTGTTGCTCTACAAAATGTGCCTGGCTTGCTTGCTGCCACTGCATCTATTAACAGTGGATTTCTTCTCAACATGGGCTCTCCTTGTCATAAAGAATGCATGGAAGATAAAGCCATAATTAAAGCAATAGAAGATGACATGGGAAAATACATCAAAATCCTTGTGGAGGTTGGAGTACCTGGTACTATCCTGCGATGCTTACATCATATGGAGTTGAAGGAGTTGGGCAGGCCTGTTGCCTTTCTTGCTAAAATGGTCAGCCATCGACCTTTGGCATTTCAACTTGTGAGCCAAGGTCTCCTAGATCCAAATAGGATGAGAAGGTTTTTTGATTGTTTAGTCCCAAAGGAGGTCATACTAGATTCCCTCATGATAGTTTCTGATCTTGCTCGGATGGACAAGGCGTTCTACGAATACATTAAAGGTGCTTCAATCTTGGAGATTTTGAAAGGTTTTCTTTTGCATGAGGACCCCAATGTGCGCGCCAAAACTTGCAGTGCTCTTGGAAATATGTGTCGTCACAGTGCCTACTTTTATAGCCCACTTGCAAGACATCAGATTGTTAGTATTCTTATTGAACGTTGTGCTGATCCGGACAGACGTACAAGAAAATTTGCTTGCTTTGCTATTGGAAATGCAGCCTACCACAATGACATGCTATACGAAGAGCTGAGAAGATCCATTCCTCAATTGGCAAATTTGTTATTGATGGCGGAAGAGGACAAGACTAAAGCAAATGCGGCAGGTGCCCTTAGCAATTTAGTTCGCAATTCTGACAAGCTCTGTGAAGACATTGTATCCAAAGGAGCGATTCAGGCACTCCTGAAGCTAATTTCAGATTGTTCGCTTACAGCATTAAATCCTAGCAGAAATGATTCGACAAGTGAGTCCCCATTAAAGATAGCTCTCTTTTCCTTGGGAAAAATGTGTGCACACCCACCCTGCAGACAGTTCCTCCGTTCATCACCATTGTTCCCAGTTGTTGGAAGGCTCAAGCAATGCCCTGAATCATCAATTGCCAAATATGCCTCTGTAATTGTTAGCAAGGTTGCTGAAGTTTGA 4104 0.4111 MGVENYHVIELVGEGSFGKVYKGRRKHTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHENIIQMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQAIAKQLVKALYYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSMNTVVLRSIKGTPLYMAPELVREQPYNHTVDLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDTMSPQFKSFLKGLLNKAPESRLTWPALLEHPFVKEASDELETKEMSETSVSPKGCDPTRRGEEKTYQPSSGSASSSFSAATIVLSLSCLFLILIHIIIVSIQIIFITAFEENTTFPSQSEAQINCPDKETAHSTVNDPSPGFSNQNSVGETGCQRLEKLENISRTVKGAKLIGQDNEALAYILLHLKTWSEGSRNKCSDQGIVDTNRSLIILSNLVAAEALNSGGQIDELITELLAFSGAVIRVKTSEVNVMVEKSFSITKMLLDNNGSFNAISYWGHWVAIVEIYSQVVASTNDAYGRVLCEAGACITIMLSGVAQAVKSSSQTSGPEMLNETIKKILDHAITTGLVDHLCLCLKTSGSSGSSVMLRAASEACRAIWSLINALDILFLKTNAIVFPIDSLQSHSLSRLEIIDHEQSPFIGSESSKIVEAVARAFLNTKAIRVAFYYCFHQCLEAAMCSGLQLLSRCCLHSGVVPSLLCGLPSSLPVATVVSGGGDGTIVSEIFSVLSICTASLNKDPQSGDSNKRCKFTNPSALILSSCLTLAAIAQCLKSSGRNSALFMLTNSPKKQLARLSLLAHHISSDDREKTYFQPQSASAMLALASILSLESGAAIESSISEIAMPLIPRTSSLYDNLKVSSGNKNELDLSYPSGKLSYWQGLRDGCVGLLDSRLKWGGPLAVQQLCAIGVPLSLIGLLGIDGSNASHGPECSYDTVGLSPAGVIWTISSICQCLSGGASTFRQILIKNEHIKLFSDLICDAHLKLINRWIGPGGGRAGVRDIINAVIDLLAFPFVALQNVPGLLAATASINSGFLLNMGSPCHKECMEDKAIIKAIEDDMGKYIKILVEVGVPGTILRCLHHMELKELGRPVAFLAKMVSHRPLAFQLVSQGLLDPNRMRRFFDCLVPKEVILDSLMIVSDLARMDKAFYEYIKGASILEILKGFLLHEDPNVRAKTCSALGNMCRHSAYFYSPLARHQIVSILIERCADPDRRTRKFACFAIGNAAYHNDMLYEELRRSIPQLANLLLMAEEDKTKANAAGALSNLVRNSDKLCEDIVSKGAIQALLKLISDCSLTALNPSRNDSTSESPLKIALFSLGKMCAHPPCRQFLRSSPLFPVVGRLKQCPESSIAKYASVIVSKVAEV 1367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3399 1367 SUPERFAMILY Protein kinase-like (PK-like) 4 318 IPR011009 -
Mibi02g3399 1367 MobiDBLite consensus disorder prediction 261 297 - -
Mibi02g3399 1367 Coils Coil 40 60 - -
Mibi02g3399 1367 CDD STKc_STK36 4 256 - -
Mibi02g3399 1367 ProSitePatterns Protein kinases ATP-binding region signature. 12 39 IPR017441 GO:0005524
Mibi02g3399 1367 MobiDBLite consensus disorder prediction 351 370 - -
Mibi02g3399 1367 Gene3D - 1065 1364 IPR011989 -
Mibi02g3399 1367 FunFam Serine/threonine-protein kinase TIO 1094 1363 - -
Mibi02g3399 1367 FunFam Serine/threonine-protein kinase 36 3 305 - -
Mibi02g3399 1367 FunFam Aurora kinase A 1 88 - -
Mibi02g3399 1367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Mibi02g3399 1367 Pfam Protein kinase domain 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g3399 1367 PANTHER PROTEIN KINASE RELATED 3 1364 IPR045193 -
Mibi02g3399 1367 SMART arm_5 1231 1270 IPR000225 GO:0005515
Mibi02g3399 1367 SMART arm_5 1271 1325 IPR000225 GO:0005515
Mibi02g3399 1367 SMART arm_5 1147 1187 IPR000225 GO:0005515
Mibi02g3399 1367 Gene3D Transferase(Phosphotransferase) domain 1 2 307 - -
Mibi02g3399 1367 SUPERFAMILY ARM repeat 1059 1364 IPR016024 -
Mibi02g3399 1367 ProSiteProfiles Protein kinase domain profile. 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g3399 1367 SMART serkin_6 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3399 Mibi-ChrMibi02 60356816 60369777 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3399 1 245 AGC Kinase Gene Family AT3G08720 38.866 1.31e-46 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Mibi02g3399 Pkinase 2.8e-78 CL0016