Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3384 ATGAACCTCAACACCAGCACCGTCGCCTTCACCTTTGGCATCATCTTCCTTGTCCTATCCATCTTTCTCGCCTGCCTCCGCCTCCGGCAGCTCTCCGGCAACCCCGCCATGTTCACTTTTCTCGCTCCTCGTTCTCCCATCGCCGCCATACCGGTCAGCGCCACCGTCATGGAGGAACAACGAGGACTTGATGACTCTACTATCAACACCTTCCCTAAGCTCACATACCATGATATGAAGAAAAGTTCTTGTTATAACAATAATATTGAAGATCCTTCTAATTCTTCTTCTTCTTGTTCCATTTGTTTAGCTGATTATAAGGAAGAAGATATGTTAAGGTTGCTTCCTGATTGTGGTCATCATTATCATCTTCTTTGCGTTGACCTTTGGCTCAAGTCACACAACACTTGCCCTATATGTCGAACTCCAATTAATTCCTCTTCTGTTAAAGCTCATGATGATGATCGATCAAATAATTCCGTCGTTGAGAGGACATAG 498 0.4478 MNLNTSTVAFTFGIIFLVLSIFLACLRLRQLSGNPAMFTFLAPRSPIAAIPVSATVMEEQRGLDDSTINTFPKLTYHDMKKSSCYNNNIEDPSNSSSSCSICLADYKEEDMLRLLPDCGHHYHLLCVDLWLKSHNTCPICRTPINSSSVKAHDDDRSNNSVVERT 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3384 165 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 52 147 IPR013083 -
Mibi02g3384 165 Pfam Ring finger domain 98 141 IPR001841 -
Mibi02g3384 165 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 7 145 IPR045899 -
Mibi02g3384 165 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
Mibi02g3384 165 SMART ring_2 99 140 IPR001841 -
Mibi02g3384 165 CDD RING-H2_EL5_like 101 141 - -
Mibi02g3384 165 FunFam E3 ubiquitin-protein ligase ATL6 52 147 - -
Mibi02g3384 165 SUPERFAMILY RING/U-box 98 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3384 Mibi-ChrMibi02 59971533 59972030 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3384 53 142 C3H Transcription Factor Family AT5G06490 50.000 5.00e-25 94.0