Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3383 ATGAGCACAAACAACACAACAGAGTCATCATCTCATGGCACTAAACCTTTGTTTGGCGGATACGCCTATTACACCATAGGACTAACCACCTCAATCCTCCTTTTCTTCACTTTCATCATCGTCATCTTATACTTCTGCTCCCGTAGAATCGCCATGAACCCCACAAGACTCTCACAAGTTCGCAATTCAAGCTTTGCCTTACGCTCCATTATCACCGCCCAAGATCCTCCCCCAGCAACCAATAACGGTCAAGTACAGTTAGGTGTTGATGATGAGACCTTGAAGACTTATCCCGTCTTGTTATACTCCGAATTGAAGCGCGATCGGAGAGGCGGTTCTGGTGCCGGTGGTGGCTATTCAGGGACCTCAGTGGGGCCTACTTGTTCCATATGTTTGGGGGATTTCAGTGATAGTGAGTGGTTGAGGGAGTTACCGGATTGTGGACACTTGTTTCATCAGAAGTGTATTGATATGTGGTTGAGGATGAACTCTTCTTGTCCTTTGTGTCGGACGTCACCGCTTCCGTCGCCGGTTTCTACGCCGCTTGCCGAGGTTGCTCCCTTGGCAAGATCAGGGGCTTGA 582 0.4897 MSTNNTTESSSHGTKPLFGGYAYYTIGLTTSILLFFTFIIVILYFCSRRIAMNPTRLSQVRNSSFALRSIITAQDPPPATNNGQVQLGVDDETLKTYPVLLYSELKRDRRGGSGAGGGYSGTSVGPTCSICLGDFSDSEWLRELPDCGHLFHQKCIDMWLRMNSSCPLCRTSPLPSPVSTPLAEVAPLARSGA 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3383 193 CDD RING-H2_PA-TM-RING 127 170 - -
Mibi02g3383 193 Pfam Ring finger domain 127 170 IPR001841 -
Mibi02g3383 193 ProSiteProfiles Zinc finger RING-type profile. 128 170 IPR001841 -
Mibi02g3383 193 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 174 IPR013083 -
Mibi02g3383 193 SMART ring_2 128 169 IPR001841 -
Mibi02g3383 193 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 14 184 IPR045899 -
Mibi02g3383 193 SUPERFAMILY RING/U-box 127 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3383 Mibi-ChrMibi02 59962163 59962744 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3383 18 193 C3H Transcription Factor Family AT2G35910 40.678 7.99e-37 125