Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3382 ATGATGAGTAGTAACACGACGGAGCCATCTGACGGCTCACCGGAAGACTTAAGTGGATATGCCTATTACTCCTTTGGACTATCCATCGGAGTTCTTCTTCTCTTCGCTTTTGTCACGTTCCTCTTATACTTTTGCACCCGTAGGAACGCCCTCAACACATCTCAACATCTCAATCACAATAATCCTCCAAACTTTGCCTTAAGGTCCATTAATGTCACTGACCAAAATAATCCCAACTCCCTCCAACTATGTGGTGTGGATGAAGCCACCCTCAAGACTTATCCCCTCTTGTTGTACTCCGATTTGAAGCGTGACCGGAAAGGCGGTCCCGGTGGTGGTGGCGGCAATTCCGGGGAGGCGGTGGGGCCCACGTGTTCGATATGTTTGGGGGATTTTGGTGATAGTGAGTGGTTAAGGGAGTTGCCGGATTGTCATCACTTGTTTCATAGGAAGTGTATTGATATGTGGCTGAGGATGAACTCTACTTGTCCCTTGTGCCGGACTTCGCCACTTCCGACGCCGGTTTCTACGCCGTTGGCCGAAGTTGCCCCCTTGGCAAGATATGGGGCTTCATGA 576 0.5 MMSSNTTEPSDGSPEDLSGYAYYSFGLSIGVLLLFAFVTFLLYFCTRRNALNTSQHLNHNNPPNFALRSINVTDQNNPNSLQLCGVDEATLKTYPLLLYSDLKRDRKGGPGGGGGNSGEAVGPTCSICLGDFGDSEWLRELPDCHHLFHRKCIDMWLRMNSTCPLCRTSPLPTPVSTPLAEVAPLARYGAS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3382 191 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 115 171 IPR013083 -
Mibi02g3382 191 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 6 181 IPR045899 -
Mibi02g3382 191 CDD RING-H2_PA-TM-RING 124 167 - -
Mibi02g3382 191 ProSiteProfiles Zinc finger RING-type profile. 125 167 IPR001841 -
Mibi02g3382 191 SMART ring_2 125 166 IPR001841 -
Mibi02g3382 191 Pfam Ring finger domain 124 167 IPR001841 -
Mibi02g3382 191 SUPERFAMILY RING/U-box 95 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3382 Mibi-ChrMibi02 59947017 59947592 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3382 15 191 C3H Transcription Factor Family AT2G35910 44.633 2.49e-39 132