Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3368 ATGACGATGACACAGTGGAGTCGCCATGAAGATAAGCTTCTCGAGCAAGCTATAGTTATGTTTCCAGAAGGTTGCCCCAATCGATGGGAGAAAATCGCCGGCGAAGTTCCCGGAGCCACCGTCGATTTAATCTGGGAACGTTATCACGATCTTCTTCACGATGTCGCTGAAATTGACGCCGGTCGTGTTCCGATTCCGTCGTTCCCTGATTTTCCTTCTGATGCTGAACCTTCTTCGTCTGATTGGAATTCTGCTAATCAGATTTCGTTCAACTCCAAGGGGAGTAAGAATACTGATACCGATAGAAAGAAGGGCACGCCTTGGACTGAGGAAGAACATAGGCTATTCCTGAGAGGATTGGAGAAATATGGCAAGGGAGATTGGAGAAGTATTTCGAGAAATGTTGTGGTGACAAGAACACCAACTCAGGTAGCCAGTCATGCTCAGAAGTATTTTAACCGGCAAAGGGAAAAATCAAAGAAAGAGAGGAAAAGAGCAAGCATCCATGATATCACAACTGCAGACAACAACGTTGAACCTCTGGATCAAAACCAGATTGCTCCTTCAAGCCTTCAAACTCAGATTGTATCTTCTTCAGGCCTTCCATTGCATCATCAACCATCACCAATGCTTCAATTTAACCCTCAAAATCCTTCACTTGATCAATCTCTTGGGTTTGGGTACCCAAACTATGCTTTTCCAATCTAG 708 0.4463 MTMTQWSRHEDKLLEQAIVMFPEGCPNRWEKIAGEVPGATVDLIWERYHDLLHDVAEIDAGRVPIPSFPDFPSDAEPSSSDWNSANQISFNSKGSKNTDTDRKKGTPWTEEEHRLFLRGLEKYGKGDWRSISRNVVVTRTPTQVASHAQKYFNRQREKSKKERKRASIHDITTADNNVEPLDQNQIAPSSLQTQIVSSSGLPLHHQPSPMLQFNPQNPSLDQSLGFGYPNYAFPI 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3368 235 ProSiteProfiles Myb-like domain profile. 100 152 IPR001005 -
Mibi02g3368 235 ProSiteProfiles Myb-like domain profile. 1 52 IPR001005 -
Mibi02g3368 235 Gene3D - 106 157 - -
Mibi02g3368 235 MobiDBLite consensus disorder prediction 73 95 - -
Mibi02g3368 235 CDD SANT 107 152 IPR001005 -
Mibi02g3368 235 SMART sant 104 154 IPR001005 -
Mibi02g3368 235 SMART sant 2 54 IPR001005 -
Mibi02g3368 235 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 100 156 IPR017930 -
Mibi02g3368 235 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 4 219 IPR043363 -
Mibi02g3368 235 Pfam Myb-like DNA-binding domain 107 152 IPR001005 -
Mibi02g3368 235 FunFam transcription factor MYB1R1 106 157 - -
Mibi02g3368 235 Gene3D - 2 65 - -
Mibi02g3368 235 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 103 155 IPR006447 GO:0003677
Mibi02g3368 235 CDD SANT 6 52 IPR001005 -
Mibi02g3368 235 ProSiteProfiles SANT domain profile. 103 156 IPR017884 -
Mibi02g3368 235 MobiDBLite consensus disorder prediction 67 108 - -
Mibi02g3368 235 SUPERFAMILY Homeodomain-like 5 58 IPR009057 -
Mibi02g3368 235 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 56 IPR017930 -
Mibi02g3368 235 SUPERFAMILY Homeodomain-like 102 156 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3368 Mibi-ChrMibi02 59655599 59657261 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi02g3368 Myb_DNA-binding 2.4e-13 CL0123