Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3367 ATGGTGTTCTGTGATCACTGTCTAAGAAATGTAAATGGAATGCGCCCGGACGACACATCATTATGTTGTGAACGCTGTGGGAAGGTGTTGGAAAATGTGTATCTTTCTCAGGAGGCCACTTTCATTAAAGGCGGAGATGGGCAGAGTAAACTATCTGGTAATCTTTTGAAAACAATTCAAAGCGAGTATTCTGCTTCCCGCCAAAGAACATTAGAAAGAGCATTTGATGACATAAGATACCTAAGCCAGAACCTTGGAGTGGAAGATATTAATATGTCTAACCAAGCATTAGCCTTGTATAAAATAGCACTTGAAAGGAATTTCACAAAGGGAAGAAGATCAGAACAAGTACAGGCTGCTTGTCTCTACATTGCATTCCGAGATAATGATAAGCCATACCTTCTCATTGACTTTTCAAATTATTTAAGGACAAATGTCTATGTTTTAGGTGCAGTATTTTTACAGCTTTGTAAAGTATTAAGGCTTGAAGAGCACAGGATTGTTCAAAAGCCTGTTGATCCTAGTCTATTTATTTTTAAATATACAAGGAATTTATTAAATAAGAGGAGTACGGAAGTCACCGATACTGCCCTTAGAATTGTTGCCAGCATGAAACGTGATTGGATGCAGACAGGCAGGAAACCTAGTGGCTTATGTGGTGCAGCGTTGTACATAGCTGCCCTTGCACATGGTTTTAAATGCTCAAAGTCGGACATCCTAAGAATTGTCCACGTATGTGAGGCAACATTGACCAAGCGTTTGGTCGAGTTTGAGAATACAACCTCAGCAAGCTTGACTGTGGAGGAGTTGAATATGATGGCAAAAGATCGTGAAAAAATTCCTATAGAAAAACCAGATTGTGGATCAGAGGAACATGTCTCAAAGGATATCCTGTGTGAACACAAGGATAGTGGTGTCCCACATTATGACCTTGGATTATGTGAAGCCTGTTATAAGGATTTTGTTAAACTCTCTGGAGGACTTGATGGTGGTTTGGATCCTCCTGCATTTCAGCGGGCTGAGAGGGACAGAATGACAAAATCACTTTGTGAGGAAGGTGGCAGCCAATCAAGTGATTTAGAAAAAGCATCAAATGATGACTGTGCAGGCAGGAAAGAAGAGTTGCATGCTCCCGGTCCAGAAATTGTTGGAGCTGATGTTGAGCAAATGGTCACTAAAGATGGTGGGAATGATGAATTGCAGAGAGAAGATATGGGTGCTAAAACTCAAAATGAATCAGAAAGTCTCTCTGATATCGATGATTTTGAGGTTGAAAGCTACCTTCACAATGAGGAGGAGAAGCATTACAAGACACTTATATGGACTGAAATGAACAGGGAGTATCTTGAGGAGCAAGCAGCCAAGGAAGCAGCTGCCGCCGCTGCTAAGGAAGCTTTTGAGGCAAATTTTCAAAACTGTTCTGAGGATATGCTAGCAGCAAAAGAGCTTGCTGAATCTGCTGCTGCAGCTGTGGCTAAATCCAGAAAGGAAAAGAAGCAAAGGCGTGCCCAAGAGGCAAAGAATTCAGGTCCTGCTCAATCTGCTGCAGAGGCTACACGTAAAATGTTGATAAATAAGAGGCTGAGCTCCAAAGTCAATCTTGACCGCTTGGATGATTTATTTGATGATATTGAGGCTTTGGAGAACAATAAAGTACGATCGGAGCCAGACTCTGGTAGAGATGGTAAATTAGAGCCTGAGCTAGACGACAAGGTCAAGGGAGACGATAATGGATCAGTTGATGAATTTGAGTATCGAGGTCATATAGGCAAGGATAATAATTTGCATGATGAGAATTTGATGGAATATGACTTTGAAGATGATAGTTATGGCTATGATGATTACTGA 1848 0.4118 MVFCDHCLRNVNGMRPDDTSLCCERCGKVLENVYLSQEATFIKGGDGQSKLSGNLLKTIQSEYSASRQRTLERAFDDIRYLSQNLGVEDINMSNQALALYKIALERNFTKGRRSEQVQAACLYIAFRDNDKPYLLIDFSNYLRTNVYVLGAVFLQLCKVLRLEEHRIVQKPVDPSLFIFKYTRNLLNKRSTEVTDTALRIVASMKRDWMQTGRKPSGLCGAALYIAALAHGFKCSKSDILRIVHVCEATLTKRLVEFENTTSASLTVEELNMMAKDREKIPIEKPDCGSEEHVSKDILCEHKDSGVPHYDLGLCEACYKDFVKLSGGLDGGLDPPAFQRAERDRMTKSLCEEGGSQSSDLEKASNDDCAGRKEELHAPGPEIVGADVEQMVTKDGGNDELQREDMGAKTQNESESLSDIDDFEVESYLHNEEEKHYKTLIWTEMNREYLEEQAAKEAAAAAAKEAFEANFQNCSEDMLAAKELAESAAAAVAKSRKEKKQRRAQEAKNSGPAQSAAEATRKMLINKRLSSKVNLDRLDDLFDDIEALENNKVRSEPDSGRDGKLEPELDDKVKGDDNGSVDEFEYRGHIGKDNNLHDENLMEYDFEDDSYGYDDY 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3367 615 FunFam Transcription factor IIIB subunit 173 262 - -
Mibi02g3367 615 MobiDBLite consensus disorder prediction 364 379 - -
Mibi02g3367 615 CDD CYCLIN 74 143 IPR013763 -
Mibi02g3367 615 Coils Coil 489 509 - -
Mibi02g3367 615 MobiDBLite consensus disorder prediction 491 505 - -
Mibi02g3367 615 MobiDBLite consensus disorder prediction 546 594 - -
Mibi02g3367 615 PRINTS Transcription initiation factor IIB signature 213 229 IPR000812 GO:0006352|GO:0070897
Mibi02g3367 615 PRINTS Transcription initiation factor IIB signature 119 138 IPR000812 GO:0006352|GO:0070897
Mibi02g3367 615 PRINTS Transcription initiation factor IIB signature 16 36 IPR000812 GO:0006352|GO:0070897
Mibi02g3367 615 Pfam Brf1-like TBP-binding domain 417 542 IPR011665 -
Mibi02g3367 615 Gene3D Single helix bin 408 459 - -
Mibi02g3367 615 SMART cyclin_7 176 259 IPR013763 -
Mibi02g3367 615 SMART cyclin_7 76 158 IPR013763 -
Mibi02g3367 615 Pfam Transcription factor TFIIB repeat 171 259 IPR013150 GO:0017025
Mibi02g3367 615 Pfam Transcription factor TFIIB repeat 68 157 IPR013150 GO:0017025
Mibi02g3367 615 MobiDBLite consensus disorder prediction 392 409 - -
Mibi02g3367 615 CDD CYCLIN 173 248 IPR013763 -
Mibi02g3367 615 FunFam Transcription factor IIIB 90 kDa subunit 63 166 - -
Mibi02g3367 615 SUPERFAMILY Cyclin-like 172 270 IPR036915 -
Mibi02g3367 615 MobiDBLite consensus disorder prediction 349 420 - -
Mibi02g3367 615 SUPERFAMILY Cyclin-like 74 163 IPR036915 -
Mibi02g3367 615 Gene3D - 173 267 - -
Mibi02g3367 615 MobiDBLite consensus disorder prediction 489 518 - -
Mibi02g3367 615 Gene3D - 63 165 - -
Mibi02g3367 615 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 2 532 IPR000812 GO:0006352|GO:0070897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3367 Mibi-ChrMibi02 59624196 59636808 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3367 1 523 Inorganic Solute Cotransporters AT2G01280 41.588 1.92e-111 341