Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3302 ATGGCTACTGAGGATTTCTCTCTCATCGATTCTCCCTCCCACAACAACAACCCCCACTCGCAGCCTCTCCTCCACGCGCACACGCGCCACCTCCCTTCCTCCTCGGCCGACGCCGGCGACTCCTCCAACGCCGACTACTTCACCCAACCATTCCCCGACGACGCCGAAGAATCCTCCGATCCGAACAAATCCTCCTCAGTAGGAGCCCTAACTCCTAATTCCAAGCGTAACGCCGCCGCCGCCGCCGTGGACATCTCCGATTACTCCAACAAGAAGTCCAAATCCTCTGATTTAGTATCTGAGGCGAATTACAGGGCGGATTATCGGAAGGATCGAGAGGAATGGAGCGACACGGCGATTGAGTGTCTTTTGGATGTTTACACGGAGAAATTGAACCAGTTGAATCGGGGGAATTTGCGCGGGAGGGATTGGGAGGAGGTGGCGAGGATTGTGAGTGAGAGGTGTGGTGGTGTGGAAGGGAAGGATAAGTTGTGTAAAAGTGTGGAGCAGTGTAAGAACAAGATTGATAATTTGAAGAAGAGGTATAAGGTGGAGGTTCAGAGGGTGAATAGTGGTAGTATTACGTCGAGTAGTTGGCATTGGTTTAAGAAGATTGAAGCCATTGTTGGGAATTCATTGACTGTGAGGACTGTTTCAGATGATGACAAGGGTGGTGGAGCTACTCCCTTGTCTGTGGTCAGACGCCCAAAGAACAGATATACACCCACCAATGTTGCAGTGTTGAGTAACTCAAAATCAAAACCAGCATCTAATCTGAAATGGCATAGAGTTCTTTTTAAAATCAGTGGATCTGCATTAGCTGGAAACTGCCAAAGTATTGACCCCAAGGTGGCAATGCAGATTGCTGGGGAAGTGGCGACAGCTTGCCGAATGGGGATAGAGGTTGCCATTGTTGTCGGTGGTCGTAACTTCTTTTGTGGAGATTCCTGGGTGTCTGCCACTGGGTTGGACAGGCCTACAGCTTACCAAATTGGTATGATGGCTACGGTTATGAATTCTATTCTGCTCCATTCTGCTTTGGAGAAGCTGGGTATTCAAGCACGTATTCAAAGCGGATTCTCTTTACCAGAGATTGCTGAACCTTATAACAGGCAACGAGCTATCCGACATCTCGAAAAAGGAAGGGTTGTCATACTTGGTGGTGTCGGTGCTGGCACCGGAAATCCTCTCTTCACCACTGATGCAGCCGCAGCTCTGAGAGCTTCCGAGCTTAATGCAGATGTTGTGCTGAAAGGAACAAATGTTGTTGGGGCCTATGATTGCCATAGTGGCAGTGAGAATGTAACAGTTGATCACATTTCTTTTCGGGAAGTTGCTTCTAGGGGCATCACTTCTGTAGATATGATGGCATTAGCATATTGTGAAGAGAATGGAATTCCAGTTGTAGTCTTCAACATGATTGAACCGGGGAATGTATCAAGAGCACTATGTGGAGATCAAGTTGGCACGTTGATTGATCAAACAGGAAGTATTAATTAA 1500 0.4807 MATEDFSLIDSPSHNNNPHSQPLLHAHTRHLPSSSADAGDSSNADYFTQPFPDDAEESSDPNKSSSVGALTPNSKRNAAAAAVDISDYSNKKSKSSDLVSEANYRADYRKDREEWSDTAIECLLDVYTEKLNQLNRGNLRGRDWEEVARIVSERCGGVEGKDKLCKSVEQCKNKIDNLKKRYKVEVQRVNSGSITSSSWHWFKKIEAIVGNSLTVRTVSDDDKGGGATPLSVVRRPKNRYTPTNVAVLSNSKSKPASNLKWHRVLFKISGSALAGNCQSIDPKVAMQIAGEVATACRMGIEVAIVVGGRNFFCGDSWVSATGLDRPTAYQIGMMATVMNSILLHSALEKLGIQARIQSGFSLPEIAEPYNRQRAIRHLEKGRVVILGGVGAGTGNPLFTTDAAAALRASELNADVVLKGTNVVGAYDCHSGSENVTVDHISFREVASRGITSVDMMALAYCEENGIPVVVFNMIEPGNVSRALCGDQVGTLIDQTGSIN 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3302 499 SUPERFAMILY Carbamate kinase-like 260 492 IPR036393 -
Mibi02g3302 499 MobiDBLite consensus disorder prediction 1 23 - -
Mibi02g3302 499 Coils Coil 161 188 - -
Mibi02g3302 499 Pfam Amino acid kinase family 263 472 IPR001048 -
Mibi02g3302 499 Gene3D - 115 184 - -
Mibi02g3302 499 FunFam Aspartate/glutamate/uridylate kinase family protein 115 184 - -
Mibi02g3302 499 CDD AAK_UMPK-PyrH-Ec 263 493 IPR015963 GO:0005737|GO:0006221|GO:0033862
Mibi02g3302 499 Gene3D - 251 498 IPR036393 -
Mibi02g3302 499 MobiDBLite consensus disorder prediction 1 76 - -
Mibi02g3302 499 Hamap Uridylate kinase [pyrH]. 259 493 IPR015963 GO:0005737|GO:0006221|GO:0033862
Mibi02g3302 499 PANTHER URIDYLATE KINASE 108 498 - -
Mibi02g3302 499 MobiDBLite consensus disorder prediction 34 48 - -
Mibi02g3302 499 Pfam Myb/SANT-like DNA-binding domain 112 208 IPR044822 -
Mibi02g3302 499 FunFam Uridylate kinase isoform A 253 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3302 Mibi-ChrMibi02 58649952 58653120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3302 115 219 Trihelix Transcription Factor Family AT3G14180 39.048 9.30e-17 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mibi02g3302 AA_kinase 4.7e-20 No_clan