Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3301 ATGGTATCACCGAAGCCGCGTTCTCTGAGGGATGCTTCTGAGTCCTCCAAGATGGAGGGCACTGATTCCTGGGATACCCTTGATTGGACCAACATTCAGCCTCATTCACGTTACGTTTCGCATTCCAATTTTGATTTCTTGCTTGAGCAGGAAAACGTCATAGCCCAGGGACATGGTGTTGTTCTTATTAATTCAGATGATGCAGGCACATTGATGGTCACAAATTTTCGTCTTGTTTTTCTGAGTGATCGAACTGGAAATATTATTGCCCTTGGAACAATTCCACTTGCAACAATTGAGACGTTTAACAAGATGGCTGTAAAGATGCAGTCTGCTAATCGTGAATCAGACAAGACACCCCCACAAAGGCTGCTCCAGGTTATTGGAAAAGATATGAGAATTATCGTTTTTGGTTTCAGGCCTCACACAAAACAGAGGCATGCCATATTTGATGGCTTAGTAAGAAGTGTAAAGCCAACTGCACTATGGGATCTTTATGCATTTGTATGTGGACCTTCTAGGTTTACTAACTCTAGCCCCAAGGTGCGCCTACTAGACGAGTATTTCCGGCTTCTTGGAAAACACACTTATCGTGCTACAGTCAACATGATTGGAAGTGAGTCCTTTACCCTGTCAAATGACTTGTGGAGAATAAGTAAAGTGAATTCTAACTACAGCATGTGCCAGAGTTATCCTTTCGCTTTGATTGTACCAAAGACCATAAGTGACGATGAAGTGCAACAAGCATCCAGCTTTCGCAGTAAATGTCGAGTTCCTGTAGTTTCATGGTGCCACCCAGATACGGGAGCAGTTCTTGCACGTTCATCCCAACCTTTAGTTGGTATCATGATGAATATGAGGAGCAATGCAGATGAAAAACTTGTGGCTGGATTATTTGGCGAACTAAGTGATGGCGCACGCAGGAAGCTTTATATAGCTGATGCAAGGCCGAGGAAAAATGCATTAGCTAATGGGGCCATGGGAGGTGGTTCAGAATCATCTTCAAATTACTCTCAGTGTGAGGTACTTTTTTTTGGCATAGACAATATCCATGCAATGAGAGAGAGCTTTTTTCGGCTGAGAGAGTGCCTGGACACTCATGGCAAAGCATCATCAGATGGAGTGTCATCTTTTTTGAGACATGGTGGGTCAACGTGGGGTGGAGGAAATCTAAGTAGTATGTCTACTTCAGTATCTCTTCTTGGGGACAGTGGGTGGGTATTACGCGTTCAAAGTGTCTTAGCTGGTGCTGCTTGGATTGCTGCTCGCCTTCATATGGAAAAGGCTTCTGTTCTTGTACATTGCAGTGATGGCTGGGATAGAACAAGTCAGTTGGTTTCTCTTGCTAATTTGTTACTTGATCCATACTACCGCACATTCACAGGGTTTCAGGCACTTGTTGAAAAGGACTGGCTAGCATTTGGTCACCCATTTTCTGATCGTATGGGAATGCCCTCCGTCCCTGGAAGTGGCAATATGCCCTTTGAGTTGACTAGACAGTCTTCTACTGGAAGTAGCCCTTCATCACCCATGCGCCAGTCATCATTCACATCTCAATCATCCACTTCTCATGCACAGACTTCAAGCCAATACTCTCCCATTTTTTTGCAGTGGGTTGATTGTGTTTCGCAACTGCTGCGGATGTATCCTTTTGCTTTTGAATTCTCCTCGGTTTTCCTGGTGGACTTCCTGGACTGTGTTCTTTCTTGTCGATTTGGAAACTTCTTATGTAATAGTGAGAAGGAAAGGCAGCAATGCAATGTTTTTGAGGCTTGCGGGTGTTTGTGGGCATACTTGGCTGACTTGCGTGCTTCTGAAGGAAAGTCTCACGTGCATTATAATCTCTATTATGACCCATTGAAGTACAATGGTCCTATCTTGCCCCCAGCAGCAGCTTTAGCCCCAATAATATGGCCCCAATTTCTTCTTCGCTGGGCTTGTCCAGAAGAAGCACAGGCTGCTGTTGAAATTGATGCAGAATGTAGGCGAACGTTTTTGGAATACTCTGAGATGCTGAAGGCTAAAGAGCTGGCAGAGAGGAAAGCCAAAGAAATTGAAACTGCCATGGAATCATTGAGCTCAGAATTACAACATGAGAAACAGGTAAGATGGTCAGCTATGAACATGTCCAAGAAAATAAGCAAAGAGAATGTTGCCATAAAACGAGCAATTCAGTCACTGGGGTGCAAGTTTCACTTATCTGACAATGGCGATTGCTTTTTTGGTATCGAAAGCAATTTAGTTGGTTCATCACAAACCTCTGCTCATCCTTCCACCAAAAAGGATTTGGATAGTAAATCACGTGATGACAAGAAGGATCTGTCTGTTTCAGTAGCCGTTAATGAGGATGATGATCATGATGATGGTGCAGACTATGCAATTGTTCGAATATGTGAATCTCTATGCCCCCTTGGTACCCCAAATGGACGCTGCAGGTGGCCAAATGCTGGTTGTGCTCAACTGAATAATCAGCTTGTTGGTCTTAGGGCAAATTTTGATGCATTTGACCAGTTGTCGATTGATGATAGTTATTTTAAATCTGAATGA 2547 0.437 MVSPKPRSLRDASESSKMEGTDSWDTLDWTNIQPHSRYVSHSNFDFLLEQENVIAQGHGVVLINSDDAGTLMVTNFRLVFLSDRTGNIIALGTIPLATIETFNKMAVKMQSANRESDKTPPQRLLQVIGKDMRIIVFGFRPHTKQRHAIFDGLVRSVKPTALWDLYAFVCGPSRFTNSSPKVRLLDEYFRLLGKHTYRATVNMIGSESFTLSNDLWRISKVNSNYSMCQSYPFALIVPKTISDDEVQQASSFRSKCRVPVVSWCHPDTGAVLARSSQPLVGIMMNMRSNADEKLVAGLFGELSDGARRKLYIADARPRKNALANGAMGGGSESSSNYSQCEVLFFGIDNIHAMRESFFRLRECLDTHGKASSDGVSSFLRHGGSTWGGGNLSSMSTSVSLLGDSGWVLRVQSVLAGAAWIAARLHMEKASVLVHCSDGWDRTSQLVSLANLLLDPYYRTFTGFQALVEKDWLAFGHPFSDRMGMPSVPGSGNMPFELTRQSSTGSSPSSPMRQSSFTSQSSTSHAQTSSQYSPIFLQWVDCVSQLLRMYPFAFEFSSVFLVDFLDCVLSCRFGNFLCNSEKERQQCNVFEACGCLWAYLADLRASEGKSHVHYNLYYDPLKYNGPILPPAAALAPIIWPQFLLRWACPEEAQAAVEIDAECRRTFLEYSEMLKAKELAERKAKEIETAMESLSSELQHEKQVRWSAMNMSKKISKENVAIKRAIQSLGCKFHLSDNGDCFFGIESNLVGSSQTSAHPSTKKDLDSKSRDDKKDLSVSVAVNEDDDHDDGADYAIVRICESLCPLGTPNGRCRWPNAGCAQLNNQLVGLRANFDAFDQLSIDDSYFKSE 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3301 848 MobiDBLite consensus disorder prediction 759 782 - -
Mibi02g3301 848 ProSiteProfiles Myotubularin phosphatase domain. 194 642 IPR010569 -
Mibi02g3301 848 ProSitePatterns Tyrosine specific protein phosphatases active site. 433 443 IPR016130 GO:0016311|GO:0016791
Mibi02g3301 848 SUPERFAMILY PH domain-like 47 170 - -
Mibi02g3301 848 SMART gram2001c 38 106 IPR004182 -
Mibi02g3301 848 Pfam Myotubularin-like phosphatase domain 166 584 IPR010569 -
Mibi02g3301 848 PANTHER MYOTUBULARIN-RELATED 38 772 IPR030564 -
Mibi02g3301 848 MobiDBLite consensus disorder prediction 750 782 - -
Mibi02g3301 848 Gene3D - 58 156 IPR011993 -
Mibi02g3301 848 MobiDBLite consensus disorder prediction 493 524 - -
Mibi02g3301 848 CDD PTP-MTM-like 256 544 - -
Mibi02g3301 848 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 210 646 IPR029021 -
Mibi02g3301 848 Coils Coil 668 702 - -
Mibi02g3301 848 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3301 Mibi-ChrMibi02 58635140 58648379 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3301 1 846 Protein tyrosine phosphatase (PTP) family AT3G10550 62.864 0.0 1087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g3301 02 58635140 58648379 Mibi02g3301 02 58635140 58648379 ECH